RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 RHBDL3P58872 404 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 RNASE9P60153 205 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 ASIC1P78348 528 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 BASP1P80723 227 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 MYBPC1Q00872 1141 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 AMPD3Q01432 767 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CTBSQ01459 385 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 MECOMQ03112 1051 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DMPKQ09013 629 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 HSPA14Q0VDF9 509 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 WASHC5Q12768 1159 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DLG1Q12959 904 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 STX3Q13277 289 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 IFIT5Q13325 482 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 MPP2Q14168 576 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 E2F2Q14209 437 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ADGRE1Q14246 886 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ARHGEF6Q15052 776 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TCEAL1Q15170 157 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DLGAP5Q15398 846 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CYTH1Q15438 398 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 OASLQ15646 514 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 PHKG1Q16816 387 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TXNRD1Q16881 649 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TMEM266Q2M3C6 531 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 RGS21Q2M5E4 152 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 PROSER3Q2NL68 480 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZNF829Q3KNS6 432 aaPredicted RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 MMEL1Q495T6 779 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TBC1D10BQ4KMP7 808 aaPredicted RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 BOLA3Q53S33 107 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DCAF6Q58WW2 860 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 EARS2Q5JPH6 523 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 GNASQ5JWF2 1037 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 C6orf10Q5SRN2 563 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 RARS2Q5T160 578 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 C6orf183Q5T699 404 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 WDR78Q5VTH9 848 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 AGAP7PQ5VUJ5 663 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 BTBD8Q5XKL5 378 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 SIGIRRQ6IA17 410 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 PPP4R4Q6NUP7 873 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TTC27Q6P3X3 843 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ALKBH5Q6P6C2 394 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 TTC23LQ6PF05 361 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CCDC137Q6PK04 289 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 LVRNQ6Q4G3 990 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 AGMOQ6ZNB7 445 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 LRRC69Q6ZNQ3 347 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 FAM196AQ6ZSG2 479 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 H2AFVQ71UI9 128 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 LPCAT2Q7L5N7 544 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 FASTKD5Q7L8L6 764 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 ATG9AQ7Z3C6 839 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 MIER3Q7Z3K6 550 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ITIH5Q86UX2 942 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZNF354CQ86Y25 554 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TICAM1Q8IUC6 712 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 MMAAQ8IVH4 418 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 TRIM59Q8IWR1 403 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CHERPQ8IWX8 916 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 SRRM1Q8IYB3 904 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 SCYL3Q8IZE3 742 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ELMOD1Q8N336 334 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CPSF7Q8N684 471 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 UBL4BQ8N7F7 174 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 C4orf32Q8N8J7 132 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 PRELID2Q8N945 189 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 MIGA1Q8NAN2 632 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DAGLBQ8NCG7 672 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 PDPRQ8NCN5 879 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 BBOF1Q8ND07 529 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TNIP2Q8NFZ5 429 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TTLL11Q8NHH1 800 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 LILRB4Q8NHJ6 448 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZFP28Q8NHY6 868 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ANGPTL6Q8NI99 470 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 OLIG1Q8TAK6 271 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZNF420Q8TAQ5 688 aaPredicted RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 HM13Q8TCT9 377 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CALML6Q8TD86 181 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 GRK7Q8WTQ7 553 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 GDPD5Q8WTR4 605 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TRUB1Q8WWH5 349 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 NANOS1Q8WY41 292 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 TRIB2Q92519 343 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZNF75CPQ92670 426 aaPredicted RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 DPF3Q92784 378 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 MTBPQ96DY7 904 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 TMA16Q96EY4 203 aaKnown RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 PLEKHA8Q96JA3 519 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZNF512BQ96KM6 892 aaPredicted RBP2.84□□□□□ -1.95
MDC1-208ENST00000494654 CCDC138Q96M89 665 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 NLRP4Q96MN2 994 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 RANBP9Q96S59 729 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CYTH2Q99418 400 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 DOK1Q99704 481 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 MYD88Q99836 296 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 ZSWIM1Q9BR11 485 aa2.84□□□□□ -1.95
MDC1-208ENST00000494654 CCDC77Q9BR77 488 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms