RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 ELAVL1Q15717 326 aaKnown RBP4.74□□□□□ -1.65
CMSS1-207ENST00000494412 SLC9C2Q5TAH2 1124 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 ARHGAP40Q5TG30 622 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 TSHZ3Q63HK5 1081 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 ATG16L1Q676U5 607 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 DRICH1Q6PGQ1 229 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-207ENST00000494412 BBS12Q6ZW61 710 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 FASTKD5Q7L8L6 764 aaKnown RBP4.74□□□□□ -1.65
CMSS1-207ENST00000494412 ANKS1BQ7Z6G8 1248 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 FAM124AQ86V42 546 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 OR52N2Q8NGI0 321 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 LRIG1Q96JA1 1093 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 ZNF668Q96K58 619 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-207ENST00000494412 HIST1H2AAQ96QV6 131 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 VSX1Q9NZR4 365 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-207ENST00000494412 NDUFAF4Q9P032 175 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 ASAP1Q9ULH1 1129 aa4.74□□□□□ -1.65
CMSS1-207ENST00000494412 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-207ENST00000494412 ARID1BQ8NFD5 2236 aaPredicted RBP4.74□□□□□ -1.65
CMSS1-207ENST00000494412 A0A087X0M5 115 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 A0A1B0GX30 115 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 FSD2A1L4K1 749 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 KIF28PB7ZC32 967 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 STX16-NPEPL1H3BU86 382 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 EXOC5O00471 708 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 STX16O14662 325 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 MFAP3LO75121 409 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 TAF5LO75529 589 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 CNPP09543 421 aaKnown RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 PRKAR1BP31321 381 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 NAP1L1P55209 391 aaKnown RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 CAP1Q01518 475 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 MC2RQ01718 297 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 PDCLQ13371 301 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 SMAD1Q15797 465 aaKnown RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 P3H1Q32P28 736 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 TRIM60Q495X7 471 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 GALNTL6Q49A17 601 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 SPATA1Q5VX52 437 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 HAUS3Q68CZ6 603 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 ACAD10Q6JQN1 1059 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 RGS7BPQ6MZT1 257 aaPredicted RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 SYNE3Q6ZMZ3 975 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 SLC15A3Q8IY34 581 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 ANKRD52Q8NB46 1076 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 TDRD7Q8NHU6 1098 aaKnown RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 FEZF2Q8TBJ5 459 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 POC1BQ8TC44 478 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 SNRNP27Q8WVK2 155 aaKnown RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 HMGB4Q8WW32 186 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 RFFLQ8WZ73 363 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 ZBTB45Q96K62 511 aaPredicted RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 OR14A2Q96R54 314 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 LMF1Q96S06 567 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 REEP2Q9BRK0 252 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 CENPOQ9BU64 300 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 PTDSS2Q9BVG9 487 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 PLA2G12BQ9BX93 195 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 TRIM5Q9C035 493 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 HSFX1Q9UBD0 423 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 ORC3Q9UBD5 711 aaPredicted RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 PI4KBQ9UBF8 816 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 VPS51Q9UID3 782 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 NDRG4Q9ULP0 352 aaKnown RBP4.73□□□□□ -1.65
CMSS1-207ENST00000494412 TBX20Q9UMR3 447 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 USP22Q9UPT9 525 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 CNTN6Q9UQ52 1028 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 DNAJC16Q9Y2G8 782 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 AATKQ6ZMQ8 1374 aa4.73□□□□□ -1.65
CMSS1-207ENST00000494412 DHHO43323 396 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 B4GALT3O60512 393 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 ZBED4O75132 1171 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 ERN1O75460 977 aaKnown RBP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 CER1O95813 267 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 CPA1P15085 419 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 ADORA2AP29274 412 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 MAGEA10P43363 369 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 CLNS1AP54105 237 aaKnown RBP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 SLURP1P55000 103 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 SF3A3Q12874 501 aaKnown RBP eCLIP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 E2F2Q14209 437 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 CSHL1Q14406 222 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 GRM7Q14831 915 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 TSTQ16762 297 aaKnown RBP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 PREPLQ4J6C6 727 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 CERCAMQ5T4B2 595 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 TTLL5Q6EMB2 1281 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 CLEC9AQ6UXN8 241 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 NEK10Q6ZWH5 1172 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 CHD1LQ86WJ1 897 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 SYT12Q8IV01 421 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 FSTL5Q8N475 847 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 MDGA1Q8NFP4 955 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 MBD3L2Q8NHZ7 208 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 ZNF483Q8TF39 744 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-207ENST00000494412 ZDHHC12Q96GR4 267 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 C7orf26Q96N11 449 aa4.72□□□□□ -1.65
CMSS1-207ENST00000494412 NUDT16L1Q9BRJ7 211 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms