RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PENKP01210 267 aaPredicted RBP2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 IVLP07476 585 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 GSTA1P08263 222 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 CYP21A2P08686 494 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 OAS2P29728 719 aaKnown RBP2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 HNRNPH1P31943 449 aaKnown RBP2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 NT5C2P49902 561 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 SCNN1BP51168 640 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 SMC1AQ14683 1233 aaKnown RBP2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 BCL2A1Q16548 175 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZSCAN26Q16670 478 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 ERCC6LQ2NKX8 1250 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 WDR78Q5VTH9 848 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 HDGFL2Q7Z4V5 671 aaPredicted RBP2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 THNSL2Q86YJ6 484 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 SYT12Q8IV01 421 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 CMTM4Q8IZR5 234 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 OR5M3Q8NGP4 307 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 COG1Q8WTW3 980 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 AGAP3Q96P47 875 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 SLC5A4Q9NY91 659 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 PRSS50Q9UI38 385 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 SORCS3Q9UPU3 1222 aa2.81□□□□□ -1.96
CDC42EP3-205ENST00000494083 PMS2P1A4D2B8 440 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 E9PQ18 207 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 PES1O00541 588 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 MAGEB2O15479 319 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 SH3BP5O60239 455 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 RANBP6O60518 1105 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 MFAP3LO75121 409 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 S100BP04271 92 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 FGFR2P21802 821 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 MARCKSP29966 332 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 PDIA3P30101 505 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 APOBEC3AP31941 199 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 CSRP3P50461 194 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 SLC18A1P54219 525 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 NPEPPSP55786 919 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ANKRD1Q15327 319 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 IL17AQ16552 155 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ALS2CLQ60I27 953 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 MTHFD1LQ6UB35 978 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 LRIG3Q6UXM1 1119 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 GBP6Q6ZN66 633 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ANKRD18AQ8IVF6 992 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 PPM1KQ8N3J5 372 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZNF610Q8N9Z0 462 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 RNF169Q8NCN4 708 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ATP8B4Q8TF62 1192 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ANKS1AQ92625 1134 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 P3H4Q92791 437 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 SLC5A5Q92911 643 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 SLCO2A1Q92959 643 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 LPPQ93052 612 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 HAPLN3Q96S86 360 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 POLR3CQ9BUI4 534 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 NUP62CLQ9H1M0 184 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 KCTD10Q9H3F6 313 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 CXorf56Q9H5V9 222 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZNF703Q9H7S9 590 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 LRRC42Q9Y546 428 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 RPS6KL1Q9Y6S9 549 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZNF804BA4D1E1 1349 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 XDHP47989 1333 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 SCN9AQ15858 1988 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 AKR1B15C9JRZ8 316 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 PRAMEF4O60810 478 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 N4BP1O75113 896 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 CSF1RP07333 972 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 VIL1P09327 827 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 NEFHP12036 1026 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 NDUFA8P51970 172 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 G3BP1Q13283 466 aaKnown RBP eCLIP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 UAP1Q16222 522 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 KRTAP15-1Q3LI76 137 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ZCWPW2Q504Y3 356 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 RRP12Q5JTH9 1297 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 GPR158Q5T848 1215 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 CGB2Q6NT52 195 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ESPNLQ6ZVH7 1005 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 REPS2Q8NFH8 660 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 MDGA1Q8NFP4 955 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 ST8SIA2Q92186 375 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 LTV1Q96GA3 475 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 AGAP2Q99490 1192 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 XPO4Q9C0E2 1151 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 NRDE2Q9H7Z3 1164 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 TRPV5Q9NQA5 729 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 DMRT3Q9NQL9 472 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 DACT1Q9NYF0 836 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 CDC23Q9UJX2 597 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 A0A1B0GUL7 405 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 FRMD3A2A2Y4 597 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 SCAF4O95104 1147 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 NBPF7P0C2Y1 421 aaPredicted RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 LINGO3P0C6S8 592 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 GNAT2P19087 354 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 SKIV2L2P42285 1042 aaKnown RBP2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 CCT5P48643 541 aa2.8□□□□□ -1.96
CDC42EP3-205ENST00000494083 EIF5P55010 431 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms