RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CCT8L1PA6NM43 557 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 MEIS1O00470 390 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 NRP1O14786 923 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 CLGNO14967 610 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 GAS2O43903 313 aaKnown RBP11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 PAPSS2O95340 614 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 ZNF806P0C7X5 589 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 SPATA31D3P0C874 917 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 DRD4P21917 467 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 CHRNA3P32297 505 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 STAT1P42224 750 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 MMP13P45452 471 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 SCTRP47872 440 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 RAB27AP51159 221 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 POU5F1Q01860 360 aaKnown RBP11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 MYBPC2Q14324 1141 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 KRT71Q3SY84 523 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 AASDHQ4L235 1098 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 CEP55Q53EZ4 464 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 STPG1Q5TH74 334 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 CEP128Q6ZU80 1094 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 SPATA31D4Q6ZUB0 917 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 STXBP4Q6ZWJ1 553 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 TAS1R1Q7RTX1 841 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 NT5DC3Q86UY8 548 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 RHOT2Q8IXI1 618 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 UBLCP1Q8WVY7 318 aaPredicted RBP11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 PLIN2Q99541 437 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 ADAM33Q9BZ11 813 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 FAM105AQ9NUU6 356 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 SAMD15Q9P1V8 674 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 FNIP2Q9P278 1114 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 ADAMTS1Q9UHI8 967 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 DDX25Q9UHL0 483 aaKnown RBP11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 ODF2LQ9ULJ1 636 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 PCDHA12Q9UN75 941 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 SLC12A4Q9UP95 1085 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 INPP5FQ9Y2H2 1132 aa11.2□□□□□ -0.62
PDLIM1-205ENST00000493949 EML5Q05BV3 1969 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 FAM86B1E9PN63 330 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 LIN7AO14910 233 aaPredicted RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 FAM86B2P0C5J1 330 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 PLA2G4BP0C869 781 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 SKIV2L2P42285 1042 aaKnown RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 AFF1P51825 1210 aaKnown RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 CDC42EP1Q00587 391 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 PTK2Q05397 1052 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 ADAM9Q13443 819 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 KNOP1Q1ED39 458 aaKnown RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 DENND2CQ68D51 928 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 DUPD1Q68J44 220 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 C11orf63Q6NUN7 778 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 EPM2AIP1Q7L775 607 aaPredicted RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 DYMQ7RTS9 669 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 GRASPQ7Z6J2 395 aaPredicted RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 PIGWQ7Z7B1 504 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 PALB2Q86YC2 1186 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 KLHL7Q8IXQ5 586 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 MAB21L3Q8N8X9 362 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 URGCPQ8TCY9 931 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 TMEM174Q8WUU8 243 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 RAPGEF5Q92565 580 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 DNASE1L2Q92874 299 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 HVCN1Q96D96 273 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 PGBD4Q96DM1 585 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 RSRC1Q96IZ7 334 aaKnown RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 IFT74Q96LB3 600 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 PSMB7Q99436 277 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 JPH2Q9BR39 696 aaPredicted RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 ERP44Q9BS26 406 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 ANO3Q9BYT9 981 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 PPANQ9NQ55 473 aaKnown RBP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 OLFML3Q9NRN5 406 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 HEBP1Q9NRV9 189 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 EHD2Q9NZN4 543 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 KANSL3Q9P2N6 904 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 SEL1LQ9UBV2 794 aa11.19□□□□□ -0.62
PDLIM1-205ENST00000493949 PCNX2A6NKB5 2137 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 ESYT3A0FGR9 886 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 MAN2B1O00754 1011 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 ECI2O75521 394 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 WFS1O76024 890 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 POU2F2P09086 479 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 HNRNPA1P09651 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 CYP11B2P19099 503 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 NR2F2P24468 414 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 HOXA9P31269 272 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 HPDP32754 393 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 MAN1A1P33908 653 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 PDE6CP51160 858 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 SEC24CP53992 1094 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 PPP2R5AQ15172 486 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 EPHA7Q15375 998 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 SF3A2Q15428 464 aaKnown RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 TNFAIP8L3Q5GJ75 292 aa11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 TWF2Q6IBS0 349 aaKnown RBP11.18□□□□□ -0.62
PDLIM1-205ENST00000493949 PSAPL1Q6NUJ1 521 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms