RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 FGFR1OPO95684 399 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CAPNS1P04632 268 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 THBDP07204 575 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 PABPC1P11940 636 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CKBP12277 381 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CAPN2P17655 700 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 ARF4P18085 180 aaPredicted RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CDK11BP21127 795 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 NR2F2P24468 414 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 RPL13P26373 211 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 HOXA11P31270 313 aaPredicted RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 LIG4P49917 911 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 SNRPFP62306 86 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CYP4F3Q08477 520 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 PRPF4BQ13523 1007 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 LRRC26Q2I0M4 334 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 TRIM60Q495X7 471 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 ATF7IP2Q5U623 682 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CYP2R1Q6VVX0 501 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 TSHZ1Q6ZSZ6 1077 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CATSPER4Q7RTX7 472 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 ANKRD33Q7Z3H0 272 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 NECAB2Q7Z6G3 386 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 SPPL2CQ8IUH8 684 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CREBRFQ8IUR6 639 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 C12orf56Q8IXR9 622 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 OXR1Q8N573 874 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 ANKS4BQ8N8V4 417 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 TMEM145Q8NBT3 493 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 TMEM52Q8NDY8 209 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 GOLGA5Q8TBA6 731 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 NOC3LQ8WTT2 800 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 THAP3Q8WTV1 239 aaPredicted RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 POMGNT1Q8WZA1 660 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 DPF3Q92784 378 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 SAAL1Q96ER3 474 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 TCHPQ9BT92 498 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 MRPL4Q9BYD3 311 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 THAP9Q9H5L6 903 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 AGO3Q9H9G7 860 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 PTPRHQ9HD43 1115 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 HSPBP1Q9NZL4 362 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 CGNQ9P2M7 1197 aaKnown RBP7.11□□□□□ -1.27
TRA2B-216ENST00000493864 ATP11BQ9Y2G3 1177 aa7.11□□□□□ -1.27
TRA2B-216ENST00000493864 LAMA3Q16787 3333 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 A0A1B0GUA9 196 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 FADS2P1A8MWK0 482 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 KCNJ18B7U540 433 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 H0YGN5 161 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 M0QZ92 97 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 CLDN3O15551 220 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 EXOC3O60645 756 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 RPS6KA5O75582 802 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 TOM1L1O75674 476 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 ERLIN2O94905 339 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 CPP00450 1065 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 RPLP2P05387 115 aaKnown RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 GHRP10912 638 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 FGFR1P11362 822 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 HARSP12081 509 aaKnown RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 RAC2P15153 192 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 PAMP19021 973 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 PROZP22891 400 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 CD52P31358 61 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 TRHRP34981 398 aaPredicted RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 MATR3P43243 847 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 KIR2DL1P43626 348 aaPredicted RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 KIR2DL2P43627 348 aaPredicted RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 MRE11P49959 708 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 TPM4P67936 248 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 CHRNEQ04844 493 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 MCL1Q07820 350 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 LAPTM5Q13571 262 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 MYBPC2Q14324 1141 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 KCNJ12Q14500 433 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 LPIN1Q14693 890 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 KRT31Q15323 416 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 SLC14A2Q15849 920 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 NFIL3Q16649 462 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 TCP11X2Q5H9J9 407 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 FBXO47Q5MNV8 452 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 ZBTB41Q5SVQ8 909 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 FOXB2Q5VYV0 432 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 HLA-DQA1Q5Y7H0 255 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 SLFN12LQ6IEE8 588 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 ARMCX5Q6P1M9 558 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 APTXQ7Z2E3 356 aaKnown RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 NOP9Q86U38 636 aaKnown RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 FAM228AQ86W67 206 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 JAMLQ86YT9 394 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 XXYLT1Q8NBI6 393 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 FRS2Q8WU20 508 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 TMEM174Q8WUU8 243 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 KCTD13Q8WZ19 329 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 BORCS6Q96GS4 357 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 CNOT6LQ96LI5 555 aaKnown RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 TOX2Q96NM4 488 aa7.1□□□□□ -1.27
TRA2B-216ENST00000493864 NAP1L5Q96NT1 182 aaPredicted RBP7.1□□□□□ -1.27
TRA2B-216ENST00000493864 VPS16Q9H269 839 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms