RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 SATB1Q01826 763 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 LMNB2Q03252 620 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 SIM2Q14190 667 aaPredicted RBP14.37□□□□□ -0.11
IRF1-210ENST00000493208 CCDC142Q17RM4 750 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 CCDC40Q4G0X9 1142 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 HSF5Q4G112 596 aaPredicted RBP14.37□□□□□ -0.11
IRF1-210ENST00000493208 TXNDC11Q6PKC3 985 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 TSSK4Q6SA08 328 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.37□□□□□ -0.11
IRF1-210ENST00000493208 FUKQ8N0W3 1084 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 TAS1R2Q8TE23 839 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 HEXIM2Q96MH2 286 aaKnown RBP14.37□□□□□ -0.11
IRF1-210ENST00000493208 DUSP9Q99956 384 aaKnown RBP14.37□□□□□ -0.11
IRF1-210ENST00000493208 CSNK1G1Q9HCP0 422 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 CFAP97Q9P2B7 532 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 HESX1Q9UBX0 185 aa14.37□□□□□ -0.11
IRF1-210ENST00000493208 CILPO75339 1184 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 ALDH1A2O94788 518 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 APODP05090 189 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 CCDC130P13994 396 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 ATP5C1P36542 298 aaKnown RBP14.36□□□□□ -0.11
IRF1-210ENST00000493208 ID4P47928 161 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 GALK1P51570 392 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 GAD2Q05329 585 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 PPP3CAQ08209 521 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 SCARA3Q6AZY7 606 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 FOXR2Q6PJQ5 311 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 ERMP1Q7Z2K6 904 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 TRMT11Q7Z4G4 463 aaKnown RBP14.36□□□□□ -0.11
IRF1-210ENST00000493208 FILIP1Q7Z7B0 1213 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 WDR5BQ86VZ2 330 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 KCNK16Q96T55 309 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 RBM12Q9NTZ6 932 aaKnown RBP14.36□□□□□ -0.11
IRF1-210ENST00000493208 FAM49BQ9NUQ9 324 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 SMPD4Q9NXE4 827 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 IL37Q9NZH6 218 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 KIAA1257Q9ULG3 409 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 SCML2Q9UQR0 700 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 ZNF510Q9Y2H8 683 aa14.36□□□□□ -0.11
IRF1-210ENST00000493208 F5P12259 2224 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 FAM92AA1XBS5 289 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 SHISA7A6NL88 538 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 TLR5O60602 858 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 RNF40O75150 1001 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 RETP07949 1114 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 CCDC192P0DO97 292 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 ACO1P21399 889 aaKnown RBP14.35□□□□□ -0.11
IRF1-210ENST00000493208 SPOPLQ6IQ16 392 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 KLHDC10Q6PID8 442 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 SYT13Q7L8C5 426 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 SMYD4Q8IYR2 804 aaPredicted RBP14.35□□□□□ -0.11
IRF1-210ENST00000493208 TRIML1Q8N9V2 468 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 SUMF1Q8NBK3 374 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 ENGASEQ8NFI3 743 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 SPATA20Q8TB22 786 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 TMEM176AQ96HP8 235 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 CHAMP1Q96JM3 812 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 XPO6Q96QU8 1125 aaKnown RBP14.35□□□□□ -0.11
IRF1-210ENST00000493208 SLC22A12Q96S37 553 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 PNKPQ96T60 521 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 DUSP16Q9BY84 665 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 UBXN6Q9BZV1 441 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 CHORDC1Q9UHD1 332 aaPredicted RBP14.35□□□□□ -0.11
IRF1-210ENST00000493208 STRIP2Q9ULQ0 834 aa14.35□□□□□ -0.11
IRF1-210ENST00000493208 TNFRSF10BO14763 440 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 P4HA2O15460 535 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 COCHO43405 550 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 APBB3O95704 486 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 ADH5P11766 374 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 PRKCSHP14314 528 aaPredicted RBP14.34□□□□□ -0.11
IRF1-210ENST00000493208 MCCD1P59942 119 aaPredicted RBP14.34□□□□□ -0.11
IRF1-210ENST00000493208 MRPS21P82921 87 aaKnown RBP14.34□□□□□ -0.11
IRF1-210ENST00000493208 BYSLQ13895 437 aaKnown RBP14.34□□□□□ -0.11
IRF1-210ENST00000493208 DHCR24Q15392 516 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 STILQ15468 1287 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 FSTL4Q6MZW2 842 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 Q6ZS52 159 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 CACNA2D4Q7Z3S7 1137 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 KIAA2013Q8IYS2 634 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 C12orf29Q8N999 325 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 SCAMP5Q8TAC9 235 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 KCNV2Q8TDN2 545 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 LOXL4Q96JB6 756 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 FAM81BQ96LP2 452 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 SDCBP2Q9H190 292 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 CISHQ9NSE2 258 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 GMIPQ9P107 970 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 DNMT3LQ9UJW3 386 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 USP18Q9UMW8 372 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 NME7Q9Y5B8 376 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 COL4A2P08572 1712 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 PATJQ8NI35 1801 aa14.34□□□□□ -0.11
IRF1-210ENST00000493208 RPP40O75818 363 aaKnown RBP14.33□□□□□ -0.12
IRF1-210ENST00000493208 EGFP01133 1207 aa14.33□□□□□ -0.12
IRF1-210ENST00000493208 ZDHHC11BP0C7U3 371 aa14.33□□□□□ -0.12
IRF1-210ENST00000493208 ANP32AP39687 249 aaKnown RBP14.33□□□□□ -0.12
IRF1-210ENST00000493208 GRIA2P42262 883 aa14.33□□□□□ -0.12
IRF1-210ENST00000493208 PLA2G4AP47712 749 aa14.33□□□□□ -0.12
IRF1-210ENST00000493208 FNTBP49356 437 aa14.33□□□□□ -0.12
IRF1-210ENST00000493208 CACNA2D1P54289 1103 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms