RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 TNRC18O15417 2968 aaPredicted RBP7.56□□□□□ -1.2
TPR-208ENST00000492973 UMODL1Q5DID0 1318 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 MROH7Q68CQ1 1323 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 IGKV6-21A0A0C4DH24 114 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 TCRBV16S1A1N1A0A5B0 115 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 E9PMD0 336 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 SLC26A4O43511 780 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 LRG1P02750 347 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 CKMP06732 381 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 SRGAP2CP0DJJ0 459 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 PYGMP11217 842 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 ITGB8P26012 769 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 RARRES1P49788 294 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 TUSC3Q13454 348 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 DRP2Q13474 957 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 ZRSR1Q15695 479 aaKnown RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 VWA3BQ502W6 1294 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 XKR9Q5GH70 373 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 TCERG1LQ5VWI1 586 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 RRAGBQ5VZM2 374 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 CD300LDQ6UXZ3 194 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 ZC3H18Q86VM9 953 aaKnown RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 ZC3H7AQ8IWR0 971 aaKnown RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 RBM12BQ8IXT5 1001 aaKnown RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 SYNPOQ8N3V7 929 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 CNNM3Q8NE01 707 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 DHX58Q96C10 678 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 CALML4Q96GE6 196 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 TOE1Q96GM8 510 aaKnown RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 PAGE5Q96GU1 130 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 CEP170P1Q96L14 293 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 SYT3Q9BQG1 590 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 GORASP1Q9BQQ3 440 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 PYM1Q9BRP8 204 aaKnown RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 FUCA2Q9BTY2 467 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 TNMDQ9H2S6 317 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 DHX33Q9H6R0 707 aaKnown RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 PCDH18Q9HCL0 1135 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 NGRNQ9NPE2 291 aaKnown RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 XPNPEP1Q9NQW7 623 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 BLOC1S4Q9NUP1 217 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 TUBE1Q9UJT0 475 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 ZMYND8Q9ULU4 1186 aaPredicted RBP7.55□□□□□ -1.2
TPR-208ENST00000492973 NUB1Q9Y5A7 615 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 PMF1-BGLAPU3KQ54 211 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 DOCK5Q9H7D0 1870 aa7.55□□□□□ -1.2
TPR-208ENST00000492973 RANBP2P49792 3224 aaKnown RBP7.54□□□□□ -1.2
TPR-208ENST00000492973 SYCE3A1L190 88 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 CCDC66A2RUB6 948 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 MAGEB2O15479 319 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 MAFO75444 373 aaPredicted RBP7.54□□□□□ -1.2
TPR-208ENST00000492973 ASMTLO95671 621 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 EYA4O95677 639 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 AMY2AP04746 511 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 SYN1P17600 705 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 AMY2BP19961 511 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 CYP2C18P33260 490 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 SARSP49591 514 aaKnown RBP7.54□□□□□ -1.2
TPR-208ENST00000492973 CLCN3P51790 818 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 DLX2Q07687 328 aaPredicted RBP7.54□□□□□ -1.2
TPR-208ENST00000492973 GPNMBQ14956 572 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 GPR19Q15760 415 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 TAF2Q6P1X5 1199 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 TEPPQ6URK8 271 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 LRSAM1Q6UWE0 723 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 OTUD6AQ7L8S5 288 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 RPAINQ86UA6 219 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 GAS2L3Q86XJ1 694 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 GRAMD1CQ8IYS0 662 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 LRRC71Q8N4P6 559 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 DNAJB3Q8WWF6 145 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 STAMQ92783 540 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 ERCC4Q92889 916 aaPredicted RBP7.54□□□□□ -1.2
TPR-208ENST00000492973 YIPF4Q9BSR8 244 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 FAM49AQ9H0Q0 323 aaPredicted RBP7.54□□□□□ -1.2
TPR-208ENST00000492973 WNT8AQ9H1J5 351 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 BHMT2Q9H2M3 363 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 HIPK3Q9H422 1215 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 DNM3Q9UQ16 869 aa7.54□□□□□ -1.2
TPR-208ENST00000492973 PDE4DIPQ5VU43 2346 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 KDM3AQ9Y4C1 1321 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 SMIM35A0A1B0GVV1 85 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 ARHGEF35A5YM69 484 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 H0YGN5 161 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 FFAR3O14843 346 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 GSTA4O15217 222 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 USO1O60763 962 aaKnown RBP7.53□□□□□ -1.2
TPR-208ENST00000492973 RFPL3O75679 317 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 TIMP1P01033 207 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 CHRNA1P02708 482 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 LTFP02788 710 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 PLA2G4BP0C869 781 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 CKBP12277 381 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 CYP11B2P19099 503 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 THPOP40225 353 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 STAT6P42226 847 aa7.53□□□□□ -1.2
TPR-208ENST00000492973 SLC12A3P55017 1021 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms