RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 FHL3Q13643 280 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 ARHGEF7Q14155 803 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 SLC29A2Q14542 456 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 KCNAB1Q14722 419 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 KRT72Q14CN4 511 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 SF3B3Q15393 1217 aaKnown RBP3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 ZNF750Q32MQ0 723 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 ARHGAP40Q5TG30 622 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 RGS7BPQ6MZT1 257 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 C1orf228Q6PIY5 440 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 TSHZ1Q6ZSZ6 1077 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 KIAA0408Q6ZU52 694 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 RNF44Q7L0R7 432 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 KRT28Q7Z3Y7 464 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 LNX2Q8N448 690 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 FANCBQ8NB91 859 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 GLIS1Q8NBF1 620 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 CYP2W1Q8TAV3 490 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 MYCBPAPQ8TBZ2 947 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 BPIFB1Q8TDL5 484 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 DDB2Q92466 427 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 UROC1Q96N76 676 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 MOGAT1Q96PD6 335 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 PPP1R9BQ96SB3 815 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 SELENOOQ9BVL4 669 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 STK33Q9BYT3 514 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 TBC1D23Q9NUY8 699 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 INTS13Q9NVM9 706 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 ARPP21Q9UBL0 812 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 SERTAD3Q9UJW9 196 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 HDAC9Q9UKV0 1011 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 RIPOR2Q9Y4F9 1068 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 TRGV11A0A075B6L2 103 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 WDR27A2RRH5 827 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 F5H697 171 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 IFRD1O00458 451 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 PPM1DO15297 605 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 THAP12O43422 761 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 RHOP08100 348 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 MYL4P12829 197 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 GPD1P21695 349 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 ADORA2AP29274 412 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 CD6P30203 668 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 KRT17Q04695 432 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 BTKQ06187 659 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 CHAF1AQ13111 956 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 MGAT5BQ3V5L5 792 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 PREPLQ4J6C6 727 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 MANEALQ5VSG8 457 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 VWA1Q6PCB0 445 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 USP49Q70CQ1 688 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 MAVSQ7Z434 540 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 YAF2Q8IY57 180 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 COLGALT2Q8IYK4 626 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 SDR16C5Q8N3Y7 309 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 HASPINQ8TF76 798 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 ATG4AQ8WYN0 398 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 FAM136AQ96C01 138 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 LRRC46Q96FV0 321 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 TMEM41AQ96HV5 264 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 PDLIM2Q96JY6 352 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 TRIM5Q9C035 493 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 GBA2Q9HCG7 927 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 FOXJ2Q9P0K8 574 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 IGSF9Q9P2J2 1179 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 VPS51Q9UID3 782 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 SNX14Q9Y5W7 946 aa3.48□□□□□ -1.85
HMGB1P30-201ENST00000492455 ZNF804BA4D1E1 1349 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 MANSC4A6NHS7 340 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 F5H423 210 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 ADAMTS3O15072 1205 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 CD3EAPO15446 510 aaKnown RBP3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 ARP10275 920 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 PDIA3P30101 505 aaKnown RBP3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 COPAP53621 1224 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 ITGA8P53708 1063 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 MAPK10P53779 464 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 PROK1P58294 105 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 TIAL1Q01085 375 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 OS9Q13438 667 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 LY6KQ17RY6 165 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 INSCQ1MX18 579 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 MTX3Q5HYI7 312 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 CACHD1Q5VU97 1274 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 ICE2Q659A1 982 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 RUSC1-AS1Q66K80 236 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 RAP1GAP2Q684P5 730 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 KIAA0895LQ68EN5 471 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 CRTC1Q6UUV9 634 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 LAYNQ6UX15 382 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 BEND5Q7L4P6 421 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 TXLNBQ8N3L3 684 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 DNAJB14Q8TBM8 379 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 TMEM171Q8WVE6 324 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 PPP2R3CQ969Q6 453 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 ZNF566Q969W8 418 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 AIFM2Q9BRQ8 373 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 WACQ9BTA9 647 aa3.47□□□□□ -1.85
HMGB1P30-201ENST00000492455 ACTRT3Q9BYD9 372 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms