RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 PPP2R3CQ969Q6 453 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 P2RX7Q99572 595 aaKnown RBP4.98□□□□□ -1.61
PHC3-213ENST00000491258 GBA2Q9HCG7 927 aaPredicted RBP4.98□□□□□ -1.61
PHC3-213ENST00000491258 STAP2Q9UGK3 403 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 MED16Q9Y2X0 877 aa4.98□□□□□ -1.61
PHC3-213ENST00000491258 SCRIBQ14160 1630 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 ALG1L2C9J202 215 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 TULP3O75386 442 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 CTSAP10619 480 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 APEHP13798 732 aaKnown RBP4.97□□□□□ -1.61
PHC3-213ENST00000491258 THBS4P35443 961 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 CDKN2AP42771 156 aaKnown RBP4.97□□□□□ -1.61
PHC3-213ENST00000491258 RPS13P62277 151 aaKnown RBP4.97□□□□□ -1.61
PHC3-213ENST00000491258 PTCHD3Q3KNS1 767 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 DAB2IPQ5VWQ8 1189 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 ZNF549Q6P9A3 640 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 GAS2L3Q86XJ1 694 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 C16orf71Q8IYS4 520 aaPredicted RBP4.97□□□□□ -1.61
PHC3-213ENST00000491258 MAFAQ8NHW3 353 aaPredicted RBP4.97□□□□□ -1.61
PHC3-213ENST00000491258 HSPBAP1Q96EW2 488 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 HS6ST2Q96MM7 605 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 TRMOQ9BU70 441 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 SNX15Q9NRS6 342 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 DRG1Q9Y295 367 aaKnown RBP4.97□□□□□ -1.61
PHC3-213ENST00000491258 STXBP5LQ9Y2K9 1186 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 SPEF1Q9Y4P9 236 aa4.97□□□□□ -1.61
PHC3-213ENST00000491258 FER1L4A9Z1Z3 1794 aa4.96□□□□□ -1.61
PHC3-213ENST00000491258 GTPBP1O00178 669 aaKnown RBP4.96□□□□□ -1.62
PHC3-213ENST00000491258 T-ENOLP0DO92 83 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 DIO1P49895 249 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 CFHR1Q03591 330 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 PLA1AQ53H76 456 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 CC2D1BQ5T0F9 858 aaKnown RBP4.96□□□□□ -1.62
PHC3-213ENST00000491258 CERCAMQ5T4B2 595 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 DENND2CQ68D51 928 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 LMBRD2Q68DH5 695 aaPredicted RBP4.96□□□□□ -1.62
PHC3-213ENST00000491258 RANBP10Q6VN20 620 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 RAB11FIP4Q86YS3 637 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 SPARTQ8N0X7 666 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 RBMXL3Q8N7X1 1067 aaKnown RBP4.96□□□□□ -1.62
PHC3-213ENST00000491258 RAPGEF4Q8WZA2 1011 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 ZFYVE19Q96K21 471 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 MRGPRX1Q96LB2 322 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 MS4A7Q9GZW8 240 aaPredicted RBP4.96□□□□□ -1.62
PHC3-213ENST00000491258 ZSCAN32Q9NX65 697 aa4.96□□□□□ -1.62
PHC3-213ENST00000491258 CNOT3O75175 753 aaKnown RBP4.95□□□□□ -1.62
PHC3-213ENST00000491258 ALDH2P05091 517 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 CCNIQ14094 377 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 KCNB1Q14721 858 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 SLC9C1Q4G0N8 1177 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 TMEM240Q5SV17 173 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 UBAP2Q5T6F2 1119 aaKnown RBP4.95□□□□□ -1.62
PHC3-213ENST00000491258 RNF187Q5TA31 235 aaPredicted RBP4.95□□□□□ -1.62
PHC3-213ENST00000491258 VSTM1Q6UX27 236 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 PLBD2Q8NHP8 589 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 CTAGE1Q96RT6 745 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 MAP3K14Q99558 947 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 CGRRF1Q99675 332 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 PIH1D1Q9NWS0 290 aaKnown RBP4.95□□□□□ -1.62
PHC3-213ENST00000491258 USP22Q9UPT9 525 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 WASHC2CQ9Y4E1 1318 aa4.95□□□□□ -1.62
PHC3-213ENST00000491258 A0A087WWL8 130 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 CYSRT1A8MQ03 144 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 PRSS44E7EML9 344 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 CREB1P16220 341 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 PRKAR1BP31321 381 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 MTHFSP49914 203 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 GRAMD1CQ8IYS0 662 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 MPP5Q8N3R9 675 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 DNAJB14Q8TBM8 379 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 ASPSCR1Q9BZE9 553 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 MAFFQ9ULX9 164 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 LUC7L2Q9Y383 392 aaKnown RBP4.94□□□□□ -1.62
PHC3-213ENST00000491258 NOTCH4Q99466 2003 aa4.94□□□□□ -1.62
PHC3-213ENST00000491258 M0R3H8 397 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 BCAT1P54687 386 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 YPEL5P62699 121 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 CTBP1Q13363 440 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 MTX1Q13505 466 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 FGL2Q14314 439 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 TMEM63BQ5T3F8 832 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 ZNF783Q6ZMS7 281 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 KRT78Q8N1N4 520 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 LINC01465Q8N7H1 131 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 CAMK1GQ96NX5 476 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 MGAT4CQ9UBM8 478 aa4.93□□□□□ -1.62
PHC3-213ENST00000491258 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.93□□□□□ -1.62
PHC3-213ENST00000491258 TGFB3P10600 412 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 AKAP5P24588 427 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 CPA2P48052 419 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 RAB1AP62820 205 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 RHDQ02161 417 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 ZNF750Q32MQ0 723 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 MMP21Q8N119 569 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 PELI3Q8N2H9 469 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 HPS3Q969F9 1004 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 MLXIPQ9HAP2 919 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 ZBTB40Q9NUA8 1239 aa4.92□□□□□ -1.62
PHC3-213ENST00000491258 EIF4G1Q04637 1599 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms