RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 BIRC3Q13489 604 aa11□□□□□ -0.65
TTC28-207ENST00000490475 MORC3Q14149 939 aa11□□□□□ -0.65
TTC28-207ENST00000490475 ZNF699Q32M78 642 aa11□□□□□ -0.65
TTC28-207ENST00000490475 AASDHQ4L235 1098 aaPredicted RBP11□□□□□ -0.65
TTC28-207ENST00000490475 ZCWPW2Q504Y3 356 aa11□□□□□ -0.65
TTC28-207ENST00000490475 COBLL1Q53SF7 1204 aa11□□□□□ -0.65
TTC28-207ENST00000490475 ZNF667Q5HYK9 610 aa11□□□□□ -0.65
TTC28-207ENST00000490475 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
TTC28-207ENST00000490475 WDR44Q5JSH3 913 aa11□□□□□ -0.65
TTC28-207ENST00000490475 IL31Q6EBC2 164 aa11□□□□□ -0.65
TTC28-207ENST00000490475 NUP93Q8N1F7 819 aa11□□□□□ -0.65
TTC28-207ENST00000490475 RPLP0P6Q8NHW5 317 aa11□□□□□ -0.65
TTC28-207ENST00000490475 PARD3BQ8TEW8 1205 aa11□□□□□ -0.65
TTC28-207ENST00000490475 DUSP9Q99956 384 aaKnown RBP11□□□□□ -0.65
TTC28-207ENST00000490475 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
TTC28-207ENST00000490475 FRMD4BQ9Y2L6 1034 aa11□□□□□ -0.65
TTC28-207ENST00000490475 WNT6Q9Y6F9 365 aa11□□□□□ -0.65
TTC28-207ENST00000490475 E2F8A0AVK6 867 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 TRIM49BA6NDI0 452 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 LRRIQ3A6PVS8 624 aaPredicted RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 LEFTY2O00292 366 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 IKBKBO14920 756 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 ALDH1A2O94788 518 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 OAS1P00973 400 aaKnown RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 RPL13P26373 211 aaKnown RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 YWHAQP27348 245 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 CLDN10P78369 228 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 MRPS21P82921 87 aaKnown RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 DMWDQ09019 674 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 DMC1Q14565 340 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 NFIL3Q16649 462 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 SGSM1Q2NKQ1 1148 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 USP39Q53GS9 565 aaKnown RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 KLHL10Q6JEL2 608 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 UNC93AQ86WB7 457 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 TTC16Q8NEE8 873 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 GPT2Q8TD30 523 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 SMARCD1Q96GM5 515 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 SLC22A12Q96S37 553 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 MRPL45Q9BRJ2 306 aaKnown RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 GTPBP4Q9BZE4 634 aaKnown RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 IMPG2Q9BZV3 1241 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 CLSTN2Q9H4D0 955 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 FBXO44Q9H4M3 255 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 DMAP1Q9NPF5 467 aaPredicted RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 VPS45Q9NRW7 570 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 NXF1Q9UBU9 619 aaKnown RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.99□□□□□ -0.65
TTC28-207ENST00000490475 MYH10P35580 1976 aa10.99□□□□□ -0.65
TTC28-207ENST00000490475 ACACBO00763 2458 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 MAPK13O15264 365 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 ABL1P00519 1130 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 APODP05090 189 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 DPP6P42658 865 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 DGKEP52429 567 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 MYL6P60660 151 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 ENPEPQ07075 957 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 GOLGA8FQ08AF8 430 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 GOLGA8DPQ0D2H9 430 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 TAF10Q12962 218 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 SRSF5Q13243 272 aaKnown RBP10.98□□□□□ -0.65
TTC28-207ENST00000490475 NCOA4Q13772 614 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 BYSLQ13895 437 aaKnown RBP10.98□□□□□ -0.65
TTC28-207ENST00000490475 EDRF1Q3B7T1 1238 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 C1orf220Q5T0J3 134 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 SNX30Q5VWJ9 437 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 BTBD8Q5XKL5 378 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 TRMT11Q7Z4G4 463 aaKnown RBP10.98□□□□□ -0.65
TTC28-207ENST00000490475 FAM186BQ8IYM0 893 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 ADGRG2Q8IZP9 1017 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 TSTD1Q8NFU3 115 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 FBXO32Q969P5 355 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 ELMO3Q96BJ8 720 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 CHFRQ96EP1 664 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 DHTKD1Q96HY7 919 aaPredicted RBP10.98□□□□□ -0.65
TTC28-207ENST00000490475 MED10Q9BTT4 135 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 XYLT2Q9H1B5 865 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 CPQQ9Y646 472 aa10.98□□□□□ -0.65
TTC28-207ENST00000490475 DNAH14Q0VDD8 3507 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 DCDC2BA2VCK2 349 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 CETN3O15182 167 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 HCRTO43612 131 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 C4BPAP04003 597 aaKnown RBP10.97□□□□□ -0.65
TTC28-207ENST00000490475 ADRB1P08588 477 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 TRIM49P0CI25 452 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 TRIM49CP0CI26 452 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 MBL2P11226 248 aaPredicted RBP10.97□□□□□ -0.65
TTC28-207ENST00000490475 PSMC2P35998 433 aaKnown RBP10.97□□□□□ -0.65
TTC28-207ENST00000490475 VAMP7P51809 220 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 STX17P56962 302 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 USP46P62068 366 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 STIM1Q13586 685 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 DHCR24Q15392 516 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 PLK5Q496M5 336 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 HECTD3Q5T447 861 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 PKN3Q6P5Z2 889 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 FILIP1Q7Z7B0 1213 aa10.97□□□□□ -0.65
TTC28-207ENST00000490475 KBTBD6Q86V97 674 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms