RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FESP07332 822 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 IL6RP08887 468 aaPredicted RBP4.64□□□□□ -1.67
CD46-216ENST00000490278 NR2F6P10588 404 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 ZFXP17010 805 aaPredicted RBP4.64□□□□□ -1.67
CD46-216ENST00000490278 MST1P26927 711 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 LIPAP38571 399 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 MTHFSP49914 203 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 CLCN2P51788 898 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 BMPR2Q13873 1038 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 TRIM14Q14142 442 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 PUM3Q15397 648 aaKnown RBP4.64□□□□□ -1.67
CD46-216ENST00000490278 ARL6IP4Q66PJ3 421 aaKnown RBP4.64□□□□□ -1.67
CD46-216ENST00000490278 RAP1GAP2Q684P5 730 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 GGT6Q6P531 493 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 GGNQ86UU5 652 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 CAND1Q86VP6 1230 aaKnown RBP4.64□□□□□ -1.67
CD46-216ENST00000490278 Q8N1X5 172 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 BEND2Q8NDZ0 799 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 R3HDM4Q96D70 268 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 VN1R3Q9BXE9 311 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 LRIT1Q9P2V4 623 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 VPS51Q9UID3 782 aa4.64□□□□□ -1.67
CD46-216ENST00000490278 DRG1Q9Y295 367 aaKnown RBP4.64□□□□□ -1.67
CD46-216ENST00000490278 CCDC151A5D8V7 595 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 AGPSO00116 658 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 PSMD9O00233 223 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 VNN1O95497 513 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 ARP10275 920 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 PECAM1P16284 738 aaPredicted RBP4.63□□□□□ -1.67
CD46-216ENST00000490278 NTSR1P30989 418 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 SLC5A2P31639 672 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 ADRA1BP35368 520 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 TIRAPP58753 221 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 NSUN2Q08J23 767 aaKnown RBP eCLIP4.63□□□□□ -1.67
CD46-216ENST00000490278 FOXI1Q12951 378 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 GPS1Q13098 491 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 ELF2Q15723 593 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 PLAC9Q5JTB6 97 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 TMTC4Q5T4D3 741 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 HECTD2Q5U5R9 776 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 LAIR1Q6GTX8 287 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 ERAP2Q6P179 960 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 Q6ZPA2 131 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 USP51Q70EK9 711 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 RAB11FIP4Q86YS3 637 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 MBD3L2Q8NHZ7 208 aaPredicted RBP4.63□□□□□ -1.67
CD46-216ENST00000490278 ACTRT2Q8TDY3 377 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 IPO4Q8TEX9 1081 aaKnown RBP4.63□□□□□ -1.67
CD46-216ENST00000490278 XAGE5Q8WWM1 108 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 SLC9A6Q92581 669 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 RSPRY1Q96DX4 576 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 RIPOR2Q9Y4F9 1068 aa4.63□□□□□ -1.67
CD46-216ENST00000490278 PLEKHD1A6NEE1 506 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 ORC4O43929 436 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 URI1O94763 535 aaPredicted RBP4.62□□□□□ -1.67
CD46-216ENST00000490278 RBL1P28749 1068 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 PDIA3P30101 505 aaKnown RBP4.62□□□□□ -1.67
CD46-216ENST00000490278 GRIA3P42263 894 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 PDE1AP54750 535 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 ATP1A4Q13733 1029 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 BLMHQ13867 455 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 SPARCL1Q14515 664 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 PDCD2Q16342 344 aaPredicted RBP4.62□□□□□ -1.67
CD46-216ENST00000490278 PFKFB4Q16877 469 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 TUBB8Q3ZCM7 444 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 ZACNQ401N2 412 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 CCDC38Q502W7 563 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 ARHGAP15Q53QZ3 475 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 GORABQ5T7V8 394 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 ABLIM2Q6H8Q1 611 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 CCDC174Q6PII3 467 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 ZNF551Q7Z340 670 aaPredicted RBP4.62□□□□□ -1.67
CD46-216ENST00000490278 PEG10Q86TG7 708 aaKnown RBP4.62□□□□□ -1.67
CD46-216ENST00000490278 SMC5Q8IY18 1101 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 EXOC8Q8IYI6 725 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 ABHD5Q8WTS1 349 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 DPCDQ9BVM2 203 aaPredicted RBP4.62□□□□□ -1.67
CD46-216ENST00000490278 TOR3AQ9H497 397 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 MYH16Q9H6N6 1097 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 TMEM8AQ9HCN3 771 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 OBP2BQ9NPH6 170 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 TRIM36Q9NQ86 728 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 ARHGEF3Q9NR81 526 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 IGSF9Q9P2J2 1179 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 RIMKLBQ9ULI2 386 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 CA14Q9ULX7 337 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 FER1L4A9Z1Z3 1794 aa4.62□□□□□ -1.67
CD46-216ENST00000490278 hCG_1642624A0A1W2PR95 340 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 OR2W5A6NFC9 320 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 LGALS16A8MUM7 142 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 EXOC5O00471 708 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 PIP5K1BO14986 540 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 NPC1O15118 1278 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 FOXN1O15353 648 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 GLP2RO95838 553 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 VIPP01282 170 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 CSTBP04080 98 aaKnown RBP4.61□□□□□ -1.67
CD46-216ENST00000490278 PRKCBP05771 671 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 CD19P15391 556 aa4.61□□□□□ -1.67
CD46-216ENST00000490278 KRT4P19013 534 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms