RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 GRIA1P42261 906 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
BRD9-208ENST00000489816 ERO1BQ86YB8 467 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 RELL1Q8IUW5 271 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 OR6B3Q8NGW1 331 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 FAM172AQ8WUF8 416 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 SERAC1Q96JX3 654 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 PGLYRP2Q96PD5 576 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 ZNF395Q9H8N7 513 aaPredicted RBP16.4■□□□□ 0.22
BRD9-208ENST00000489816 SETD4Q9NVD3 440 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 MFHAS1Q9Y4C4 1052 aa16.4■□□□□ 0.22
BRD9-208ENST00000489816 H0Y3Z8 333 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 TYROBPO43914 113 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 LGR5O75473 907 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 MTDHQ86UE4 582 aaKnown RBP16.39■□□□□ 0.21
BRD9-208ENST00000489816 CMASQ8NFW8 434 aaPredicted RBP16.39■□□□□ 0.21
BRD9-208ENST00000489816 ZMAT2Q96NC0 199 aaKnown RBP16.39■□□□□ 0.21
BRD9-208ENST00000489816 MECRQ9BV79 373 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 LHX5Q9H2C1 402 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 CDHR5Q9HBB8 845 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 ASNSD1Q9NWL6 643 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 MAGED2Q9UNF1 606 aaPredicted RBP16.39■□□□□ 0.21
BRD9-208ENST00000489816 CCDC195A0A1B0GUA6 201 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 APOC4-APOC2K7ER74 178 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 APOC2P02655 101 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 F7P08709 466 aaPredicted RBP16.39■□□□□ 0.21
BRD9-208ENST00000489816 LCP1P13796 627 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 CRADDP78560 199 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 SETDB1Q15047 1291 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 POLNQ7Z5Q5 900 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 ACAP3Q96P50 834 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 TMPRSS4Q9NRS4 437 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 CACNG4Q9UBN1 327 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 TUBGCP4Q9UGJ1 667 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 SCN1AP35498 2009 aa16.39■□□□□ 0.21
BRD9-208ENST00000489816 CXorf49A8MYA2 514 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 MT-ND3P03897 115 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 BCAR1P56945 870 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 PTK7Q13308 1070 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 ZNF268Q14587 947 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 SWT1Q5T5J6 900 aaKnown RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 ZNF618Q5T7W0 954 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 TTC30AQ86WT1 665 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 PRR11Q96HE9 360 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 PAPPA2Q9BXP8 1791 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 PRMT7Q9NVM4 692 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 E2F8A0AVK6 867 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 GSTA1P08263 222 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 EZRP15311 586 aaKnown RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 PHBP35232 272 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 ARHGAP1Q07960 439 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 CCDC14Q49A88 953 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 UNC5BQ8IZJ1 945 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.38■□□□□ 0.21
BRD9-208ENST00000489816 CXorf38Q8TB03 319 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 LENG1Q96BZ8 264 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 CDCA5Q96FF9 252 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 SLC17A6Q9P2U8 582 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 NME7Q9Y5B8 376 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 EDF1O60869 148 aaKnown RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 CCDC130P13994 396 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 ZNF143P52747 638 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 GRM1Q13255 1194 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 PDK4Q16654 411 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 TAF1BQ53T94 588 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 EFHC2Q5JST6 749 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 PPP1R2P3Q6NXS1 205 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 CYP4V2Q6ZWL3 525 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 MCRS1Q96EZ8 462 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 NT5C1AQ9BXI3 368 aa16.38■□□□□ 0.21
BRD9-208ENST00000489816 EIF2AQ9BY44 585 aaKnown RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 DHX35Q9H5Z1 703 aaKnown RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 FBXO6Q9NRD1 293 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 BARX2Q9UMQ3 279 aaPredicted RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 MRPL42Q9Y6G3 142 aaKnown RBP16.38■□□□□ 0.21
BRD9-208ENST00000489816 C2CD4BA6NLJ0 364 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 H3BRB1 525 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 LPXNO60711 386 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 PFKMP08237 780 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 INHBAP08476 426 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 KITP10721 976 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 GBE1Q04446 702 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 PRAMEF19Q5SWL8 479 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 ANKRD13AQ8IZ07 590 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 PYROXD2Q8N2H3 581 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 PLD5Q8N7P1 536 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 TTC13Q8NBP0 860 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 UTP4Q969X6 686 aaKnown RBP16.37■□□□□ 0.21
BRD9-208ENST00000489816 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
BRD9-208ENST00000489816 TUT1Q9H6E5 874 aaKnown RBP16.37■□□□□ 0.21
BRD9-208ENST00000489816 IL1RAPL1Q9NZN1 696 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 MARCOQ9UEW3 520 aaPredicted RBP16.37■□□□□ 0.21
BRD9-208ENST00000489816 CFAP69A5D8W1 941 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 DIAPH2O60879 1101 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 IL18RAPO95256 599 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 ANP32DO95626 131 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 ZBED1O96006 694 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 BGNP21810 368 aa16.37■□□□□ 0.21
BRD9-208ENST00000489816 ADORA2AP29274 412 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms