RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 LRMPQ12912 555 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 HECTD3Q5T447 861 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 GPRIN1Q7Z2K8 1008 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 IRF2BP1Q8IU81 584 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 C1orf210Q8IVY1 113 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 EHBP1Q8NDI1 1231 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 CNOT6LQ96LI5 555 aaKnown RBP23.65■■□□□ 1.38
VAMP2-204ENST00000488857 UBXN6Q9BZV1 441 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 EBF3Q9H4W6 596 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 GMIPQ9P107 970 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 CHORDC1Q9UHD1 332 aaPredicted RBP23.65■■□□□ 1.38
VAMP2-204ENST00000488857 NDRG2Q9UN36 371 aaKnown RBP23.65■■□□□ 1.38
VAMP2-204ENST00000488857 SCML2Q9UQR0 700 aa23.65■■□□□ 1.38
VAMP2-204ENST00000488857 GOLGA6L22H0YM25 854 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 ABL1P00519 1130 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 ACO1P21399 889 aaKnown RBP23.64■■□□□ 1.37
VAMP2-204ENST00000488857 CT47A1Q5JQC4 288 aaPredicted RBP23.64■■□□□ 1.37
VAMP2-204ENST00000488857 TRIM68Q6AZZ1 485 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 TXNDC11Q6PKC3 985 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 ANKRD52Q8NB46 1076 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 GPT2Q8TD30 523 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 ATOH1Q92858 354 aaPredicted RBP23.64■■□□□ 1.37
VAMP2-204ENST00000488857 IER2Q9BTL4 223 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 DACH1Q9UI36 760 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 KIAA1257Q9ULG3 409 aa23.64■■□□□ 1.37
VAMP2-204ENST00000488857 OTOL1A6NHN0 477 aaPredicted RBP23.63■■□□□ 1.37
VAMP2-204ENST00000488857 LEFTY2O00292 366 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 COCHO43405 550 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 KIF11P52732 1056 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 EML3Q32P44 896 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 MAMSTRQ6ZN01 415 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 RBM43Q6ZSC3 357 aaKnown RBP23.63■■□□□ 1.37
VAMP2-204ENST00000488857 DDX42Q86XP3 938 aaKnown RBP eCLIP23.63■■□□□ 1.372e-6■■■■■ 29.9
VAMP2-204ENST00000488857 PPM1KQ8N3J5 372 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 TTC8Q8TAM2 541 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 CHRDQ9H2X0 955 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 THAP9Q9H5L6 903 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 TLR8Q9NR97 1041 aaKnown RBP23.63■■□□□ 1.37
VAMP2-204ENST00000488857 DUS2Q9NX74 493 aaKnown RBP23.63■■□□□ 1.37
VAMP2-204ENST00000488857 CPQQ9Y646 472 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 USP3Q9Y6I4 520 aa23.63■■□□□ 1.37
VAMP2-204ENST00000488857 PAEPP09466 180 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 CHRNB1P11230 501 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 ARSAP15289 507 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 IFNAR2P48551 515 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 SGO2Q562F6 1265 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 ATP2A3Q93084 1043 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 CHFRQ96EP1 664 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 ZFRQ96KR1 1074 aaKnown RBP23.62■■□□□ 1.37
VAMP2-204ENST00000488857 INTS2Q9H0H0 1204 aaKnown RBP23.62■■□□□ 1.37
VAMP2-204ENST00000488857 CYLDQ9NQC7 956 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 DMDP11532 3685 aa23.62■■□□□ 1.37
VAMP2-204ENST00000488857 MBL2P11226 248 aaPredicted RBP23.61■■□□□ 1.37
VAMP2-204ENST00000488857 VDRP11473 427 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 NBL1P41271 181 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 PGFP49763 221 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 AMPD2Q01433 879 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 CCDC186Q7Z3E2 898 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 MAML2Q8IZL2 1156 aaPredicted RBP23.61■■□□□ 1.37
VAMP2-204ENST00000488857 CPA6Q8N4T0 437 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 JAKMIP2Q96AA8 810 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 CCSER2Q9H7U1 834 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 ECT2Q9H8V3 914 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 LMAN1LQ9HAT1 526 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 WNT6Q9Y6F9 365 aa23.61■■□□□ 1.37
VAMP2-204ENST00000488857 USP34Q70CQ2 3546 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 CYP26A1O43174 497 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 HOXD11P31277 338 aaPredicted RBP23.6■■□□□ 1.37
VAMP2-204ENST00000488857 SLC8A3P57103 927 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 LRRC32Q14392 662 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 RAB41Q5JT25 222 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 DGKKQ5KSL6 1271 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 TMEM270Q6UE05 265 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 TTC30AQ86WT1 665 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 ARHGEF19Q8IW93 802 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 ZNF276Q8N554 614 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 KAT5Q92993 513 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 FAM86C1Q9NVL1 165 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 SPATA6Q9NWH7 488 aaPredicted RBP23.6■■□□□ 1.37
VAMP2-204ENST00000488857 SMPD4Q9NXE4 827 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 TSPAN16Q9UKR8 245 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 FBXO4Q9UKT5 387 aa23.6■■□□□ 1.37
VAMP2-204ENST00000488857 FANCMQ8IYD8 2048 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 GTPBP10A4D1E9 387 aaKnown RBP23.59■■□□□ 1.37
VAMP2-204ENST00000488857 PROB1E7EW31 1015 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 O00370 1275 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 TLR5O60602 858 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 PSEN1P49768 467 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 ZNF132P52740 706 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 BCAT1P54687 386 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 CCINQ13939 588 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 PON2Q15165 354 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 TPD52L1Q16890 204 aaPredicted RBP23.59■■□□□ 1.37
VAMP2-204ENST00000488857 GOLGA7BQ2TAP0 167 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 KLHDC10Q6PID8 442 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 RRAGAQ7L523 313 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 PIGZQ86VD9 579 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 FAM114A1Q8IWE2 563 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 TTC16Q8NEE8 873 aa23.59■■□□□ 1.37
VAMP2-204ENST00000488857 KREMEN1Q96MU8 473 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms