RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 NME7Q9Y5B8 376 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 MAGEB2O15479 319 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 KCNN4O15554 427 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 EDF1O60869 148 aaKnown RBP13.24□□□□□ -0.29
CLIC4-202ENST00000488683 KRT7P08729 469 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 PYGBP11216 843 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 RBL1P28749 1068 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 GPD2P43304 727 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 CPA2P48052 419 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 CRADDP78560 199 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
CLIC4-202ENST00000488683 GIMAP7Q8NHV1 300 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 FNIP1Q8TF40 1166 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 TMEM176AQ96HP8 235 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 LRRC37BQ96QE4 947 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 APOL6Q9BWW8 343 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 RAB6BQ9NRW1 208 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 RBPJLQ9UBG7 517 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 TSPAN16Q9UKR8 245 aa13.24□□□□□ -0.29
CLIC4-202ENST00000488683 MRPL42Q9Y6G3 142 aaKnown RBP13.24□□□□□ -0.29
CLIC4-202ENST00000488683 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 CYB561D2O14569 222 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 CILPO75339 1184 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 KITP10721 976 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 ARF4P18085 180 aaPredicted RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 BGNP21810 368 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 ARL4CP56559 192 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 NR1H3Q13133 447 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 ACVR2BQ13705 512 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 PDK4Q16654 411 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 PMF1Q6P1K2 205 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 CCDC62Q6P9F0 684 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 RFWD3Q6PCD5 774 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 PLPPR4Q7Z2D5 763 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 MPP5Q8N3R9 675 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 C7orf31Q8N865 590 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 MZB1Q8WU39 189 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 C10orf82Q8WW14 230 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 HPDLQ96IR7 371 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 SLC13A1Q9BZW2 595 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 DPEP3Q9H4B8 488 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 ARMCX1Q9P291 453 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 MARCOQ9UEW3 520 aaPredicted RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 TCRBV9S1A1TA0A576 114 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 UNC5CO95185 931 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 NEFHP12036 1026 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 EZRP15311 586 aaKnown RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 GBP2P32456 591 aaPredicted RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 SEPT7Q16181 437 aaKnown RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 PPP1R26Q5T8A7 1209 aaPredicted RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 ILDR2Q71H61 639 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 PPM1NQ8N819 430 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 GBP7Q8N8V2 638 aaPredicted RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 CMASQ8NFW8 434 aaPredicted RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 MAGEC3Q8TD91 643 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 FAF2Q96CS3 445 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 NCAPGQ9BPX3 1015 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 MRPL45Q9BRJ2 306 aaKnown RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 FAM167BQ9BTA0 163 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 CXorf56Q9H5V9 222 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 SLC24A2Q9UI40 661 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 TNFSF13BQ9Y275 285 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 EFR3BQ9Y2G0 817 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 PPP2R3BQ9Y5P8 575 aa13.23□□□□□ -0.29
CLIC4-202ENST00000488683 ZNF638Q14966 1978 aaKnown RBP13.23□□□□□ -0.29
CLIC4-202ENST00000488683 MED7O43513 233 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 GAS2O43903 313 aaKnown RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 ENTPD5O75356 428 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 GABBR2O75899 941 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 RNF8O76064 485 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 GSCP56915 257 aaPredicted RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 PTK7Q13308 1070 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 HADHQ16836 314 aaKnown RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 CES4AQ5XG92 561 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 LONP2Q86WA8 852 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 C18orf25Q96B23 403 aaPredicted RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 MCRS1Q96EZ8 462 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 PDZD7Q9H5P4 517 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 CACNG4Q9UBN1 327 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 GJD2Q9UKL4 321 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 STARD13Q9Y3M8 1113 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 CFAP69A5D8W1 941 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 E7ESA3 106 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 C22orf31O95567 290 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 APRTP07741 180 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 PFKMP08237 780 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 PDGFRBP09619 1106 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 IGFBP6P24592 240 aaPredicted RBP13.22□□□□□ -0.29
CLIC4-202ENST00000488683 OLIG2Q13516 323 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 ZNF618Q5T7W0 954 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 NLRP9Q7RTR0 991 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 SULF1Q8IWU6 871 aa13.22□□□□□ -0.29
CLIC4-202ENST00000488683 PYROXD2Q8N2H3 581 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms