RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 LEFTY2O00292 366 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 RPS9P46781 194 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 TUBP50607 506 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 KPNA1P52294 538 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 ITPRIPL2Q3MIP1 535 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 CT47A1Q5JQC4 288 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 RALGPS2Q86X27 583 aaPredicted RBP16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 OSCP1Q8WVF1 389 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 TFAP2BQ92481 460 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 JAKMIP2Q96AA8 810 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 FAM122AQ96E09 287 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 MSANTD3Q96H12 275 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 ZFRQ96KR1 1074 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 ZSWIM1Q9BR11 485 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 INTS2Q9H0H0 1204 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 CCSER2Q9H7U1 834 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 NMUR1Q9HB89 426 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 OSER1Q9NX31 292 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 KIAA1257Q9ULG3 409 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 CNTN6Q9UQ52 1028 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 CPQQ9Y646 472 aa16.84■□□□□ 0.29
CTDSP1-209ENST00000488627 GOLGA6L22H0YM25 854 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 O00370 1275 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 PAEPP09466 180 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 CHRNB1P11230 501 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 VDRP11473 427 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 ZNF132P52740 706 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 PDGFRLQ15198 375 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 ANGPT1Q15389 498 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 EML3Q32P44 896 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 GREB1Q4ZG55 1949 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 PKDCCQ504Y2 493 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 RAB41Q5JT25 222 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 HECTD3Q5T447 861 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 CC2D1AQ6P1N0 951 aaPredicted RBP16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 TMEM270Q6UE05 265 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 SCD5Q86SK9 330 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 PIGZQ86VD9 579 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 CREBRFQ8IUR6 639 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 C1orf210Q8IVY1 113 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 MAML2Q8IZL2 1156 aaPredicted RBP16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 KIAA1958Q8N8K9 716 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 DUS2Q9NX74 493 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 DACH1Q9UI36 760 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 TSPAN16Q9UKR8 245 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 NDRG2Q9UN36 371 aaKnown RBP16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 WNT6Q9Y6F9 365 aa16.83■□□□□ 0.28
CTDSP1-209ENST00000488627 COL4A2P08572 1712 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 TULP2O00295 520 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 NCAM2O15394 837 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 CYP26A1O43174 497 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 TBX18O95935 607 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 CD19P15391 556 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 SLC9A1P19634 815 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 MAGEA9P43362 315 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 GOLGA7BQ2TAP0 167 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 SGO2Q562F6 1265 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 C1orf228Q6PIY5 440 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 CCDC186Q7Z3E2 898 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 PHOX2BQ99453 314 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 CRACR2AQ9BSW2 395 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 ECT2Q9H8V3 914 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 CYLDQ9NQC7 956 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 TLR8Q9NR97 1041 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 SAMSN1Q9NSI8 373 aaKnown RBP16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 SMPD4Q9NXE4 827 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 PCDHB4Q9Y5E5 795 aa16.82■□□□□ 0.28
CTDSP1-209ENST00000488627 DENND4CQ5VZ89 1909 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 A0A1W2PQH9 124 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 GTPBP10A4D1E9 387 aaKnown RBP16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 TLR5O60602 858 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 CALCAP01258 141 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 MBL2P11226 248 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 APBA1Q02410 837 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 PDE4CQ08493 712 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 CNGA2Q16280 664 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 MIIPQ5JXC2 388 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 DPY19L2P1Q6NXN4 242 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 TRIM65Q6PJ69 517 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 LCLAT1Q6UWP7 414 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 MAMSTRQ6ZN01 415 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 TTC16Q8NEE8 873 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 WBP2Q969T9 261 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 IRF2BPLQ9H1B7 796 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 LMAN1LQ9HAT1 526 aa16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 UBE2TQ9NPD8 197 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 NUP210Q8TEM1 1887 aaPredicted RBP16.81■□□□□ 0.28
CTDSP1-209ENST00000488627 XPO1O14980 1071 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 GABBR2O75899 941 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 MBD3O95983 291 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 PON1P27169 355 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 MTIF2P46199 727 aaKnown RBP16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 IFNAR2P48551 515 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 BCAT1P54687 386 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 GAS6Q14393 721 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 PON2Q15165 354 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 PM20D1Q6GTS8 502 aa16.8■□□□□ 0.28
CTDSP1-209ENST00000488627 GJB7Q6PEY0 223 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms