RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MTSS1LQ765P7 747 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 GPRIN1Q7Z2K8 1008 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 NOP9Q86U38 636 aaKnown RBP16.57■□□□□ 0.24
C9orf3-219ENST00000488186 MAB21L3Q8N8X9 362 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 TMEM35BQ8NCS4 154 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 SLC35F5Q8WV83 523 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 KCTD13Q8WZ19 329 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 NACA2Q9H009 215 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 LHX5Q9H2C1 402 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 GMIPQ9P107 970 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 EPS15L1Q9UBC2 864 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 LIMD1Q9UGP4 676 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 SCML2Q9UQR0 700 aa16.57■□□□□ 0.24
C9orf3-219ENST00000488186 MOSPD3O75425 235 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 ZBED1O96006 694 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 CFHP08603 1231 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 USP17L7P0C7H9 530 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 ZBED6P86452 979 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 CDR2Q01850 454 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 ADIGQ0VDE8 80 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 TXNDC8Q6A555 127 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 MON1AQ86VX9 555 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 VSTM4Q8IW00 320 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 ARHGAP18Q8N392 663 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 MSANTD4Q8NCY6 345 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 EPS8L1Q8TE68 723 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 STK32AQ8WU08 396 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 BAP1Q92560 729 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 GOLGA1Q92805 767 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 NXPE3Q969Y0 559 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 NECAB3Q96P71 396 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-219ENST00000488186 CD320Q9NPF0 282 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 IL37Q9NZH6 218 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 NAGPAQ9UK23 515 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 CAPN11Q9UMQ6 739 aa16.56■□□□□ 0.24
C9orf3-219ENST00000488186 TRAV19A0A0A6YYK7 116 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 ZNF840PA6NDX5 716 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 SOBPA7XYQ1 873 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 PIK3R2O00459 728 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 FBXO21O94952 628 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 MMEP08473 750 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 RALAP11233 206 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 HDCP19113 662 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 TNFAIP3P21580 790 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 PSEN1P49768 467 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 RAB41Q5JT25 222 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 HECTD3Q5T447 861 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 STXBP5Q5T5C0 1151 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 TMC6Q7Z403 805 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 TMEM150AQ86TG1 271 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 TADA2BQ86TJ2 420 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 ZSCAN18Q8TBC5 510 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-219ENST00000488186 SMARCD2Q92925 531 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 PPP1R13BQ96KQ4 1090 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 ZSWIM3Q96MP5 696 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 SLC46A2Q9BY10 475 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 ULBP1Q9BZM6 244 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 MIS12Q9H081 205 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 CNGB3Q9NQW8 809 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 USP3Q9Y6I4 520 aa16.55■□□□□ 0.24
C9orf3-219ENST00000488186 A0A1W2PQH9 124 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 CKMP06732 381 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 ALADP13716 330 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 CASP14P31944 242 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 ZNF75DP51815 510 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 KLHL30Q0D2K2 578 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 BTBD8Q5XKL5 378 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 TRIM72Q6ZMU5 477 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 CCDC186Q7Z3E2 898 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 ERICH1Q86X53 443 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 DRC7Q8IY82 874 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 CMTM8Q8IZV2 173 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 C1orf131Q8NDD1 294 aaKnown RBP16.54■□□□□ 0.24
C9orf3-219ENST00000488186 TTC16Q8NEE8 873 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
C9orf3-219ENST00000488186 SLC20A1Q8WUM9 679 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 DDX1Q92499 740 aaKnown RBP16.54■□□□□ 0.24
C9orf3-219ENST00000488186 AGPAT1Q99943 283 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 TTYH3Q9C0H2 523 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 ZFP14Q9HCL3 533 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 CYLDQ9NQC7 956 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 ZNHIT6Q9NWK9 470 aaKnown RBP16.54■□□□□ 0.24
C9orf3-219ENST00000488186 AIPL1Q9NZN9 384 aa16.54■□□□□ 0.24
C9orf3-219ENST00000488186 NCANO14594 1321 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 FAM92AA1XBS5 289 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 C2orf78A6NCI8 922 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 PI4K2BG5E9Z4 385 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 SART1O43290 800 aaKnown RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 AP5Z1O43299 807 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 TADA3O75528 432 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 LSM8O95777 96 aaKnown RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 GYPCP04921 128 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 PFKLP17858 780 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 YWHAGP61981 247 aaKnown RBP eCLIP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 PDCLQ13371 301 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 FAM78AQ5JUQ0 283 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 RSRC2Q7L4I2 434 aaKnown RBP16.53■□□□□ 0.24
C9orf3-219ENST00000488186 IRF2BP2Q7Z5L9 587 aa16.53■□□□□ 0.24
C9orf3-219ENST00000488186 RNF135Q8IUD6 432 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms