RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 PLCB1Q9NQ66 1216 aa6.35□□□□□ -1.39
USP48-209ENST00000487880 NECTIN3Q9NQS3 549 aa6.35□□□□□ -1.39
USP48-209ENST00000487880 ARHGEF3Q9NR81 526 aa6.35□□□□□ -1.39
USP48-209ENST00000487880 RGL1Q9NZL6 768 aa6.35□□□□□ -1.39
USP48-209ENST00000487880 RIMKLBQ9ULI2 386 aa6.35□□□□□ -1.39
USP48-209ENST00000487880 DRG1Q9Y295 367 aaKnown RBP6.35□□□□□ -1.39
USP48-209ENST00000487880 COMMD10Q9Y6G5 202 aa6.35□□□□□ -1.39
USP48-209ENST00000487880 FER1L4A9Z1Z3 1794 aa6.35□□□□□ -1.39
USP48-209ENST00000487880 HNRNPDLO14979 420 aaKnown RBP6.34□□□□□ -1.39
USP48-209ENST00000487880 ADAMTS3O15072 1205 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 EGR1P18146 543 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 SLC5A2P31639 672 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 ATICP31939 592 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 GATMP50440 423 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 SLC5A9Q2M3M2 681 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 PRR16Q569H4 304 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 MRNIPQ6NTE8 343 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 CCDC28AQ8IWP9 274 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 CCDC150Q8NCX0 1101 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 MBD3L2Q8NHZ7 208 aaPredicted RBP6.34□□□□□ -1.39
USP48-209ENST00000487880 RP9Q8TA86 221 aaKnown RBP6.34□□□□□ -1.39
USP48-209ENST00000487880 SORCS2Q96PQ0 1159 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 AGAP2Q99490 1192 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 INO80BQ9C086 356 aaPredicted RBP6.34□□□□□ -1.39
USP48-209ENST00000487880 SLC25A32Q9H2D1 315 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 IKZF4Q9H2S9 585 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 TRIM36Q9NQ86 728 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 TM7SF3Q9NS93 570 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 CDC23Q9UJX2 597 aa6.34□□□□□ -1.39
USP48-209ENST00000487880 COL15A1P39059 1388 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 ARP10275 920 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 CXCR5P32302 372 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 ALDH9A1P49189 494 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 FHL3Q13643 280 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 CYP1B1Q16678 543 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 FAXCQ5TGI0 409 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 RAP1GAP2Q684P5 730 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 OLFML1Q6UWY5 402 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 USP49Q70CQ1 688 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 SKAP1Q86WV1 359 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 GPR150Q8NGU9 434 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 C18orf8Q96DM3 657 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 CHFRQ96EP1 664 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 ZCWPW1Q9H0M4 648 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 TMPRSS5Q9H3S3 457 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 SYNPO2LQ9H987 977 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 DLL3Q9NYJ7 618 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 USP22Q9UPT9 525 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 CEP83Q9Y592 693 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 ENTPD2Q9Y5L3 495 aa6.33□□□□□ -1.4
USP48-209ENST00000487880 OR2W5A6NFC9 320 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 GCOM1H8Y6P7 765 aaPredicted RBP6.32□□□□□ -1.4
USP48-209ENST00000487880 ORC4O43929 436 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 TTLL1O95922 423 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 PRKCBP05771 671 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 IDEP14735 1019 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 ITPKBP27987 946 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 RBL1P28749 1068 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 CTGFP29279 349 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 NTSR1P30989 418 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 HTR7P34969 479 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 TECP42680 631 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 OS9Q13438 667 aaPredicted RBP6.32□□□□□ -1.4
USP48-209ENST00000487880 CLCA4Q14CN2 919 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 MAPKAPK3Q16644 382 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.32□□□□□ -1.4
USP48-209ENST00000487880 ABLIM2Q6H8Q1 611 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 ANKRD16Q6P6B7 361 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 Q6ZWC4 215 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 WDR53Q7Z5U6 358 aaPredicted RBP6.32□□□□□ -1.4
USP48-209ENST00000487880 SIMC1Q8NDZ2 872 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 XAGE5Q8WWM1 108 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 WDYHV1Q96HA8 205 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 HIST1H2AAQ96QV6 131 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 PCDHAC1Q9H158 963 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 DUSP22Q9NRW4 184 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 SLC39A10Q9ULF5 831 aa6.32□□□□□ -1.4
USP48-209ENST00000487880 ZMYND8Q9ULU4 1186 aaPredicted RBP6.32□□□□□ -1.4
USP48-209ENST00000487880 WDR33Q9C0J8 1336 aaKnown RBP6.31□□□□□ -1.4
USP48-209ENST00000487880 A0A087WV62 115 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 H0YIZ8 118 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 M0R3H8 397 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 PODXLO00592 558 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 LDHAP00338 332 aaKnown RBP6.31□□□□□ -1.4
USP48-209ENST00000487880 LMNAP02545 664 aaKnown RBP6.31□□□□□ -1.4
USP48-209ENST00000487880 MTHFSP49914 203 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 CACNA2D1P54289 1103 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 TPTEP56180 551 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 TGFB2P61812 414 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 KRT72Q14CN4 511 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 RAB30Q15771 203 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 C1orf228Q6PIY5 440 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 DPY19L3Q6ZPD9 716 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 RAB11FIP4Q86YS3 637 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 SYTL1Q8IYJ3 562 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 METTL25Q8N6Q8 603 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 CTHRC1Q96CG8 243 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 BBC3Q96PG8 261 aaPredicted RBP6.31□□□□□ -1.4
USP48-209ENST00000487880 PRR25Q96S07 402 aa6.31□□□□□ -1.4
USP48-209ENST00000487880 WDR24Q96S15 920 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms