RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 PLEKHA7Q6IQ23 1121 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 ZNF662Q6ZS27 426 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 SLC26A9Q7LBE3 791 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 TMC8Q8IU68 726 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 SIX6OS1Q8N1H7 587 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 EFHBQ8N7U6 833 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 CLEC4CQ8WTT0 213 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 ATRIPQ8WXE1 791 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 IRGQQ8WZA9 623 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 ZNF653Q96CK0 615 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 TRMT2BQ96GJ1 504 aaKnown RBP10.07□□□□□ -0.8
MCF2L-227ENST00000486806 MYRFLQ96LU7 910 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 LACRTQ9GZZ8 138 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 SYNCQ9H7C4 482 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 LRRC4Q9HBW1 653 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 LUC7LQ9NQ29 371 aaKnown RBP10.07□□□□□ -0.8
MCF2L-227ENST00000486806 DZANK1Q9NVP4 752 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 COMMD8Q9NX08 183 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 ZDHHC7Q9NXF8 308 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 WDR35Q9P2L0 1181 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 DPP7Q9UHL4 492 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 TFR2Q9UP52 801 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 SCML2Q9UQR0 700 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 ASB3Q9Y575 518 aa10.07□□□□□ -0.8
MCF2L-227ENST00000486806 A0A0A6YYK5 440 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 BTNL10A8MVZ5 291 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 LINC01565O15544 149 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 SART1O43290 800 aaKnown RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 TADA3O75528 432 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 RFPL2O75678 378 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 ZBED1O96006 694 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 LRG1P02750 347 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 USP17L7P0C7H9 530 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 ZDHHC11BP0C7U3 371 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 CSH1P0DML2 217 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 CSH2P0DML3 217 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 DEKP35659 375 aaKnown RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 ARHGAP25P42331 645 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 EPHB3P54753 998 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 EPHA5P54756 1037 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 SNX16P57768 344 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 GPC5P78333 572 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 SLC6A3Q01959 620 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 MAMLD1Q13495 774 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 ZNF268Q14587 947 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 VEPH1Q14D04 833 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 PPM1LQ5SGD2 360 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 DNAJC24Q6P3W2 148 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 ELMSAN1Q6PJG2 1045 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 ITIH5Q86UX2 942 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 SCUBE3Q8IX30 993 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 CMASQ8NFW8 434 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 GIPC2Q8TF65 315 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 CTNNBL1Q8WYA6 563 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 RFFLQ8WZ73 363 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 CASP10Q92851 521 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 ZNF707Q96C28 371 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 FAM161BQ96MY7 647 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 LRRC3Q9BY71 257 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 FBXO44Q9H4M3 255 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 SFXN1Q9H9B4 322 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 KCND1Q9NSA2 647 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 ASNSD1Q9NWL6 643 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 CNOT8Q9UFF9 292 aaKnown RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 CHORDC1Q9UHD1 332 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-227ENST00000486806 TMEM59LQ9UK28 342 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 PPP2R2CQ9Y2T4 447 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 SCINQ9Y6U3 715 aa10.06□□□□□ -0.8
MCF2L-227ENST00000486806 YJEFN3A6XGL0 299 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 E7ENQ6 273 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 CCL16O15467 120 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 DAB1O75553 588 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 MTA2O94776 668 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 GJB6O95452 261 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 GLI1P08151 1106 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 YWHAQP27348 245 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 PGFP49763 221 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 TAF10Q12962 218 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 ADAM15Q13444 863 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 TAF5Q15542 800 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 FAM102AQ5T9C2 384 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-227ENST00000486806 SNX30Q5VWJ9 437 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 OR6B2Q6IFH4 312 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 TRNP1Q6NT89 227 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 Q7L0L9 218 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 BEND5Q7L4P6 421 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 ARCQ7LC44 396 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 DNAJB7Q7Z6W7 309 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-227ENST00000486806 SCD5Q86SK9 330 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 PHLDB2Q86SQ0 1253 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 KIAA1328Q86T90 577 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 TMEM150AQ86TG1 271 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 RHOT2Q8IXI1 618 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 TXLNBQ8N3L3 684 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 FEZF2Q8TBJ5 459 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 KIAA1524Q8TCG1 905 aa10.05□□□□□ -0.8
MCF2L-227ENST00000486806 OVCA2Q8WZ82 227 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms