RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 TTC39CQ8N584 583 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 P2RY13Q9BPV8 354 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 FBXO44Q9H4M3 255 aa19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 FBRSL1Q9HCM7 1045 aaKnown RBP19.49■□□□□ 0.71
PRPF40A-209ENST00000486100 NFATC1O95644 943 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 MBL2P11226 248 aaPredicted RBP19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 DRD1P21728 446 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 CBWD6Q4V339 395 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 DCAF17Q5H9S7 520 aaPredicted RBP19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 CBWD3Q5JTY5 395 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 CBWD5Q5RIA9 395 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 DDX42Q86XP3 938 aaKnown RBP eCLIP19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 ADGRG2Q8IZP9 1017 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 TATDN2Q93075 761 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 FAM124BQ9H5Z6 455 aaPredicted RBP19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 SMPD4Q9NXE4 827 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 ARMCX3Q9UH62 379 aaPredicted RBP19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 COQ4Q9Y3A0 265 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 PTPRDP23468 1912 aa19.48■□□□□ 0.71
PRPF40A-209ENST00000486100 SLC9A3R1O14745 358 aaPredicted RBP19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 COCHO43405 550 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 CD44P16070 742 aaKnown RBP19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 TUBP50607 506 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 CLEC20AQ6ZU45 233 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 FILIP1Q7Z7B0 1213 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 CD101Q93033 1021 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 HEXIM2Q96MH2 286 aaKnown RBP19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 CEP63Q96MT8 703 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 EPC1Q9H2F5 836 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 METTL14Q9HCE5 456 aaKnown RBP19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 PNPLA8Q9NP80 782 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 GMIPQ9P107 970 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 CFAP97Q9P2B7 532 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 OBSL1O75147 1896 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 GREB1Q4ZG55 1949 aa19.47■□□□□ 0.71
PRPF40A-209ENST00000486100 PATJQ8NI35 1801 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 PTPRZ1P23471 2315 aaPredicted RBP19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 PPP1R3GB7ZBB8 358 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 HHLA1C9JL84 531 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 K7ESF4 209 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 ATG13O75143 517 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 EGFP01133 1207 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 BMP6P22004 513 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 MORC3Q14149 939 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 FBXO43Q4G163 708 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 ZNF394Q53GI3 561 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 RUBCNQ92622 972 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 SLC35C1Q96A29 364 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 TMEM176AQ96HP8 235 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 CCSER2Q9H7U1 834 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 CISHQ9NSE2 258 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 C2orf42Q9NWW7 574 aa19.46■□□□□ 0.71
PRPF40A-209ENST00000486100 E2F8A0AVK6 867 aa19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 HOXA6P31267 233 aa19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 PPP1R26Q5T8A7 1209 aaPredicted RBP19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 NAIF1Q69YI7 327 aaPredicted RBP19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 FOXR2Q6PJQ5 311 aa19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 DUSP9Q99956 384 aaKnown RBP19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 DUSP16Q9BY84 665 aa19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 TLR8Q9NR97 1041 aaKnown RBP19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 TBC1D14Q9P2M4 693 aa19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 SCML2Q9UQR0 700 aa19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 KIF26AQ9ULI4 1882 aaPredicted RBP19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 RIF1Q5UIP0 2472 aaKnown RBP19.45■□□□□ 0.7
PRPF40A-209ENST00000486100 CHURC1-FNTBB4DL54 471 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 RNF40O75150 1001 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 ACO1P21399 889 aaKnown RBP19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 PGFP49763 221 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 RAD23BP54727 409 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 DHCR24Q15392 516 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 KLHL10Q6JEL2 608 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 TTI2Q6NXR4 508 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 PKN3Q6P5Z2 889 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 GPRIN1Q7Z2K8 1008 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 LONP2Q86WA8 852 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 SLC4A11Q8NBS3 891 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 NELFBQ8WX92 580 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 ZFRQ96KR1 1074 aaKnown RBP19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 ARID3AQ99856 593 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 CHMP5Q9NZZ3 219 aa19.44■□□□□ 0.7
PRPF40A-209ENST00000486100 ANAPC1Q9H1A4 1944 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 BICDL2A1A5D9 508 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 BIN1O00499 593 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 PMM2O15305 246 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 TLR5O60602 858 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 CYP17A1P05093 508 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 FNTBP49356 437 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 KIF11P52732 1056 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 DMWDQ09019 674 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 CCDC40Q4G0X9 1142 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 RHBDF2Q6PJF5 856 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 DCLK2Q8N568 766 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 JAKMIP2Q96AA8 810 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 OTUB2Q96DC9 234 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 HINFPQ9BQA5 517 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 UBXN6Q9BZV1 441 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 NACA2Q9H009 215 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 SMG5Q9UPR3 1016 aaKnown RBP19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 SH3BP1Q9Y3L3 701 aa19.43■□□□□ 0.7
PRPF40A-209ENST00000486100 ZNF638Q14966 1978 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms