RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 E2F8A0AVK6 867 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 TBC1D3BA6NDS4 549 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 ZZEF1O43149 2961 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 HYAL3O43820 417 aaPredicted RBP17.22■□□□□ 0.35
PDE6D-205ENST00000486044 PRPF6O94906 941 aaKnown RBP17.22■□□□□ 0.35
PDE6D-205ENST00000486044 MDH1BQ5I0G3 518 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 PIP4P1Q86T03 277 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 WDR49Q8IV35 697 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 SFTPA1Q8IWL2 248 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 PDZD8Q8NEN9 1154 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 OR5B17Q8NGF7 314 aa17.22■□□□□ 0.35
PDE6D-205ENST00000486044 MBD1Q9UIS9 605 aaPredicted RBP17.22■□□□□ 0.35
PDE6D-205ENST00000486044 SRPRBQ9Y5M8 271 aaKnown RBP17.22■□□□□ 0.35
PDE6D-205ENST00000486044 SCAMP3O14828 347 aaKnown RBP17.21■□□□□ 0.35
PDE6D-205ENST00000486044 ADAM23O75077 832 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 TACC1O75410 805 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 RTN3O95197 1032 aaPredicted RBP17.21■□□□□ 0.35
PDE6D-205ENST00000486044 SERPINF2P08697 491 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 ITPKAP23677 461 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 RPL6Q02878 288 aaKnown RBP17.21■□□□□ 0.35
PDE6D-205ENST00000486044 KDSRQ06136 332 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 HNRNPDQ14103 355 aaKnown RBP17.21■□□□□ 0.35
PDE6D-205ENST00000486044 LY6G5CQ5SRR4 150 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 PEAR1Q5VY43 1037 aaPredicted RBP17.21■□□□□ 0.35
PDE6D-205ENST00000486044 C12orf40Q86WS4 652 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 CCDC65Q8IXS2 484 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 NUP93Q8N1F7 819 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 FRMD1Q8N878 549 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 OR6B3Q8NGW1 331 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 GTPBP2Q9BX10 602 aaKnown RBP17.21■□□□□ 0.35
PDE6D-205ENST00000486044 DEC1Q9P2X7 70 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 GON4LQ3T8J9 2241 aa17.21■□□□□ 0.35
PDE6D-205ENST00000486044 PLXND1Q9Y4D7 1925 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 TNRC6BQ9UPQ9 1833 aaKnown RBP17.2■□□□□ 0.34
PDE6D-205ENST00000486044 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 FRMD3A2A2Y4 597 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 OPHN1O60890 802 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 PTPN1P18031 435 aaKnown RBP17.2■□□□□ 0.34
PDE6D-205ENST00000486044 YWHAQP27348 245 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 STAT6P42226 847 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 MESP2Q0VG99 397 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 IFRD2Q12894 506 aaPredicted RBP17.2■□□□□ 0.34
PDE6D-205ENST00000486044 ACAP1Q15027 740 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 LRSAM1Q6UWE0 723 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 TRAPPC11Q7Z392 1133 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 ZNF513Q8N8E2 541 aaPredicted RBP17.2■□□□□ 0.34
PDE6D-205ENST00000486044 OVCA2Q8WZ82 227 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 FBXO2Q9UK22 296 aaPredicted RBP17.2■□□□□ 0.34
PDE6D-205ENST00000486044 SH3BP1Q9Y3L3 701 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 CLIC4Q9Y696 253 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 PTPRJQ12913 1337 aa17.2■□□□□ 0.34
PDE6D-205ENST00000486044 ATXN2Q99700 1313 aaKnown RBP17.2■□□□□ 0.34
PDE6D-205ENST00000486044 ZNF217O75362 1048 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 SYPP08247 313 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 CHRM1P11229 460 aaPredicted RBP17.19■□□□□ 0.34
PDE6D-205ENST00000486044 TNNI1P19237 187 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 TNNC1P63316 161 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 ZNF423Q2M1K9 1284 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 WDR72Q3MJ13 1102 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 HECTD3Q5T447 861 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 SDE2Q6IQ49 451 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 CBWD2Q8IUF1 395 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 FBXO32Q969P5 355 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 MRPL45Q9BRJ2 306 aaKnown RBP17.19■□□□□ 0.34
PDE6D-205ENST00000486044 ZDHHC4Q9NPG8 344 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 KLK13Q9UKR3 277 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 LHX6Q9UPM6 363 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 MYOFQ9NZM1 2061 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 ATP8B3O60423 1300 aa17.19■□□□□ 0.34
PDE6D-205ENST00000486044 SPEGQ15772 3267 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 MYO18AQ92614 2054 aaKnown RBP17.18■□□□□ 0.34
PDE6D-205ENST00000486044 VPS37CA5D8V6 355 aaPredicted RBP17.18■□□□□ 0.34
PDE6D-205ENST00000486044 HOXC11O43248 304 aaPredicted RBP17.18■□□□□ 0.34
PDE6D-205ENST00000486044 COCHO43405 550 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 HOXB2P14652 356 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 PDCP20941 246 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 RING1Q06587 406 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 ZNF33AQ06730 810 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 ANO4Q32M45 955 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 C10orf76Q5T2E6 689 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 PHTF2Q8N3S3 785 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 NAT16Q8N8M0 369 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 CLIC6Q96NY7 704 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 DUSP9Q99956 384 aaKnown RBP17.18■□□□□ 0.34
PDE6D-205ENST00000486044 FGFBP2Q9BYJ0 223 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 ZNF518BQ9C0D4 1074 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 NACA2Q9H009 215 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 CAPN10Q9HC96 672 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 HSPBP1Q9NZL4 362 aa17.18■□□□□ 0.34
PDE6D-205ENST00000486044 FAM221BA6H8Z2 402 aa17.17■□□□□ 0.34
PDE6D-205ENST00000486044 A8MXQ7 604 aa17.17■□□□□ 0.34
PDE6D-205ENST00000486044 ARHGAP33O14559 1287 aa17.17■□□□□ 0.34
PDE6D-205ENST00000486044 TULP3O75386 442 aa17.17■□□□□ 0.34
PDE6D-205ENST00000486044 CST3P01034 146 aaPredicted RBP17.17■□□□□ 0.34
PDE6D-205ENST00000486044 DLATP10515 647 aaKnown RBP17.17■□□□□ 0.34
PDE6D-205ENST00000486044 HOXB3P14651 431 aaPredicted RBP17.17■□□□□ 0.34
PDE6D-205ENST00000486044 GABRG2P18507 467 aa17.17■□□□□ 0.34
PDE6D-205ENST00000486044 NTSR1P30989 418 aa17.17■□□□□ 0.34
PDE6D-205ENST00000486044 TUBP50607 506 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms