RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	PTPN20	Q4JDL3	420 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	PABPC1L	Q4VXU2	614 aa	Known RBP	13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	ATAT1	Q5SQI0	421 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	ELMSAN1	Q6PJG2	1045 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	HFE2	Q6ZVN8	426 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	SCD5	Q86SK9	330 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	ITIH5	Q86UX2	942 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	ELMOD1	Q8N336	334 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	KCTD13	Q8WZ19	329 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	PIWIL1	Q96J94	861 aa	Known RBP	13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	MYRFL	Q96LU7	910 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	ZSWIM3	Q96MP5	696 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	PANX2	Q96RD6	677 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	MIS12	Q9H081	205 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	NMUR1	Q9HB89	426 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	WDR6	Q9NNW5	1121 aa	Known RBP	13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	ASAH2	Q9NR71	780 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	ST7	Q9NRC1	585 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	OSER1	Q9NX31	292 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	COG5	Q9UP83	839 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	CEP83	Q9Y592	693 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	ZNF638	Q14966	1978 aa	Known RBP	13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	UNC80	Q8N2C7	3258 aa		13.37	□□□□□ -0.27
HDAC7-223	ENST00000485796	FAM92A	A1XBS5	289 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	TMCO5B	A8MYB1	307 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796		E5RJQ4	531 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	PAPSS1	O43252	624 aa	Predicted RBP	13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	PTMA	P06454	111 aa	Known RBP	13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	SP100	P23497	879 aa	Predicted RBP	13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	CBX2	Q14781	532 aa	Predicted RBP	13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	TAF5	Q15542	800 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	MEA1	Q16626	185 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	CYP4A22	Q5TCH4	519 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	CES5A	Q6NT32	575 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	TMEM110	Q86TL2	294 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	VPS36	Q86VN1	386 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	SCUBE3	Q8IX30	993 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	TMEM35B	Q8NCS4	154 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	FBXO32	Q969P5	355 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	TRMT2B	Q96GJ1	504 aa	Known RBP	13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	PPP1R13B	Q96KQ4	1090 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	HSFY1	Q96LI6	401 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	MYADM	Q96S97	322 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	DEF6	Q9H4E7	631 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	LRRC4	Q9HBW1	653 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	PNPLA8	Q9NP80	782 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	CLUH	O75153	1309 aa		13.36	□□□□□ -0.27
HDAC7-223	ENST00000485796	PATJ	Q8NI35	1801 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796		A0A1W2PQH9	124 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	ZNF840P	A6NDX5	716 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	YJEFN3	A6XGL0	299 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796		E7ENQ6	273 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	RTN3	O95197	1032 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	GJB6	O95452	261 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	ZDHHC11B	P0C7U3	371 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	FSHR	P23945	695 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	MTHFR	P42898	656 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	CDK17	Q00537	523 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	PTP4A2	Q12974	167 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	ASTE1	Q2TB18	679 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	TXNDC8	Q6A555	127 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	PM20D1	Q6GTS8	502 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	CYP26C1	Q6V0L0	522 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	TRIM72	Q6ZMU5	477 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	MMS22L	Q6ZRQ5	1243 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	PDZD4	Q76G19	769 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	GET4	Q7L5D6	327 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	STK32A	Q8WU08	396 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	MCRS1	Q96EZ8	462 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	PDLIM2	Q96JY6	352 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	CCDC42	Q96M95	316 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	RIPOR3	Q96MK2	946 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	SLC22A12	Q96S37	553 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	ATXN3L	Q9H3M9	355 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	AVEN	Q9NQS1	362 aa	Predicted RBP	13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	ADAMTS1	Q9UHI8	967 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	NUDT5	Q9UKK9	219 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	SCML2	Q9UQR0	700 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	MRPS23	Q9Y3D9	190 aa	Known RBP	13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796	MYO16	Q9Y6X6	1858 aa		13.35	□□□□□ -0.27
HDAC7-223	ENST00000485796		A0A087X0T9	212 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	SSU72P8	A0A1W2PR75	194 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	C2orf78	A6NCI8	922 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	AKR1B10	O60218	316 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	LSM8	O95777	96 aa	Known RBP	13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	TBX18	O95935	607 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	ZBED1	O96006	694 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	ABL1	P00519	1130 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	FAM228B	P0C875	321 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	DAOA	P59103	153 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	CCDC173	Q0VFZ6	552 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	SMAD2	Q15796	467 aa	Known RBP	13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	FAM183BP	Q6ZVS7	135 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	TMTC1	Q8IUR5	882 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	NPAS3	Q8IXF0	933 aa		13.34	□□□□□ -0.27
HDAC7-223	ENST00000485796	SIX6OS1	Q8N1H7	587 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms