RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CFAP97Q9P2B7 532 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 TRAF3IP3Q9Y228 551 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 NR3C1P04150 777 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
SCFD1-206ENST00000484733 PFKFB1P16118 471 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 MCCD1P59942 119 aaPredicted RBP12.16□□□□□ -0.46
SCFD1-206ENST00000484733 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 RHBDF2Q6PJF5 856 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 TTC16Q8NEE8 873 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 ZFRQ96KR1 1074 aaKnown RBP12.16□□□□□ -0.46
SCFD1-206ENST00000484733 KCNK16Q96T55 309 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 PNKPQ96T60 521 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 MED10Q9BTT4 135 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 CSNK1G1Q9HCP0 422 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 VPS45Q9NRW7 570 aa12.16□□□□□ -0.46
SCFD1-206ENST00000484733 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.15□□□□□ -0.46
SCFD1-206ENST00000484733 CALUO43852 315 aaPredicted RBP12.15□□□□□ -0.46
SCFD1-206ENST00000484733 GDF9O60383 454 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 KIF20AO95235 890 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 ADH1CP00326 375 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 ASS1P00966 412 aaKnown RBP12.15□□□□□ -0.46
SCFD1-206ENST00000484733 ADRB1P08588 477 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 TNFRSF4P43489 277 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 AASDHQ4L235 1098 aaPredicted RBP12.15□□□□□ -0.46
SCFD1-206ENST00000484733 FUKQ8N0W3 1084 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 C12orf50Q8NA57 414 aaPredicted RBP12.15□□□□□ -0.46
SCFD1-206ENST00000484733 TSTD1Q8NFU3 115 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 ATG2BQ96BY7 2078 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
SCFD1-206ENST00000484733 TM4SF5O14894 197 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 COCHO43405 550 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 RHOBTB3O94955 611 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 ABL1P00519 1130 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 SLC5A3P53794 718 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 DLG4P78352 724 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 ELF2Q15723 593 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 C1orf220Q5T0J3 134 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 SV2AQ7L0J3 742 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 CNOT6LQ96LI5 555 aaKnown RBP12.15□□□□□ -0.46
SCFD1-206ENST00000484733 SMOQ99835 787 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 SMPD4Q9NXE4 827 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 FRMD4BQ9Y2L6 1034 aa12.15□□□□□ -0.46
SCFD1-206ENST00000484733 SPAG17Q6Q759 2223 aa12.15□□□□□ -0.47
SCFD1-206ENST00000484733 FRYLO94915 3013 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 A0A1B0GVL5 298 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 AP1G2O75843 785 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 APODP05090 189 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 MPLP40238 635 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 SLC6A11P48066 632 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 DGKEP52429 567 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 GAD2Q05329 585 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 SF3A2Q15428 464 aaKnown RBP12.14□□□□□ -0.47
SCFD1-206ENST00000484733 USP39Q53GS9 565 aaKnown RBP12.14□□□□□ -0.47
SCFD1-206ENST00000484733 PPM1JQ5JR12 505 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 ACOT1Q86TX2 421 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 PHTF2Q8N3S3 785 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 ZMIZ2Q8NF64 920 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 SCAMP5Q8TAC9 235 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 KCNV2Q8TDN2 545 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 CCDC47Q96A33 483 aaKnown RBP12.14□□□□□ -0.47
SCFD1-206ENST00000484733 FBXO44Q9H4M3 255 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 CYP3A43Q9HB55 503 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 CHORDC1Q9UHD1 332 aaPredicted RBP12.14□□□□□ -0.47
SCFD1-206ENST00000484733 BCLAF3A2AJT9 711 aaKnown RBP12.14□□□□□ -0.47
SCFD1-206ENST00000484733 HOXC11O43248 304 aaPredicted RBP12.14□□□□□ -0.47
SCFD1-206ENST00000484733 ADH5P11766 374 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 GRIA2P42262 883 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 ASPAP45381 313 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 NDST1P52848 882 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 KRT85P78386 507 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 CRY1Q16526 586 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 PREPLQ4J6C6 727 aaPredicted RBP12.14□□□□□ -0.47
SCFD1-206ENST00000484733 SCARA5Q6ZMJ2 495 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 OLIG1Q8TAK6 271 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 SPATA32Q96LK8 384 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 HNRNPABQ99729 332 aaKnown RBP12.14□□□□□ -0.47
SCFD1-206ENST00000484733 KRT82Q9NSB4 513 aa12.14□□□□□ -0.47
SCFD1-206ENST00000484733 KAT7O95251 611 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 SYKP43405 635 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 KIR2DL1P43626 348 aaPredicted RBP12.13□□□□□ -0.47
SCFD1-206ENST00000484733 VAMP7P51809 220 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 SEC13P55735 322 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 INCA1Q0VD86 236 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 IFRD2Q12894 506 aaPredicted RBP12.13□□□□□ -0.47
SCFD1-206ENST00000484733 EOGTQ5NDL2 527 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 IL31Q6EBC2 164 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 ETFBKMTQ8IXQ9 262 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 PNPLA8Q9NP80 782 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 GMIPQ9P107 970 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 SH3BP1Q9Y3L3 701 aa12.13□□□□□ -0.47
SCFD1-206ENST00000484733 ALDH1A2O94788 518 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 TRIM21P19474 475 aaKnown RBP12.12□□□□□ -0.47
SCFD1-206ENST00000484733 DPYDQ12882 1025 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 C2orf27AQ580R0 203 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 LY6G5CQ5SRR4 150 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
SCFD1-206ENST00000484733 PMS2CLQ68D20 193 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms