RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 ZNF699Q32M78 642 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 PTPN20Q4JDL3 420 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 KCNT1Q5JUK3 1230 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 IZUMO2Q6UXV1 221 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 POLNQ7Z5Q5 900 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.83■□□□□ 0.61
SSR4-209ENST00000482902 TRIM55Q9BYV6 548 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 PPCSQ9HAB8 311 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 ATXN10Q9UBB4 475 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 ANGPTL2Q9UKU9 493 aa18.83■□□□□ 0.61
SSR4-209ENST00000482902 PEX10O60683 326 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 KRT3P12035 628 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 ASPAP45381 313 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 CDK7P50613 346 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 RAP1GDS1P52306 607 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 SLC25A11Q02978 314 aaKnown RBP18.83■□□□□ 0.6
SSR4-209ENST00000482902 LSAMPQ13449 338 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 ANKRD22Q5VYY1 191 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 FAM160B1Q5W0V3 765 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 PCGF5Q86SE9 256 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 JOSD2Q8TAC2 188 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 TJP2Q9UDY2 1190 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 CPSF3Q9UKF6 684 aaKnown RBP18.83■□□□□ 0.6
SSR4-209ENST00000482902 STRIP2Q9ULQ0 834 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 CLUHO75153 1309 aa18.83■□□□□ 0.6
SSR4-209ENST00000482902 CST8O60676 142 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 PENKP01210 267 aaPredicted RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 PRKCBP05771 671 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 ESRRAP11474 423 aaPredicted RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 CD19P15391 556 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 IL1R2P27930 398 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 ARFIP2P53365 341 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 GEMIN4P57678 1058 aaKnown RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 EFHC2Q5JST6 749 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 TTC7BQ86TV6 843 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 PPIL6Q8IXY8 311 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 ARFGAP1Q8N6T3 406 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 CHST13Q8NET6 341 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 ECSITQ9BQ95 431 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 TMEM120AQ9BXJ8 343 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 C12orf65Q9H3J6 166 aaKnown RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 CHCHD3Q9NX63 227 aaKnown RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 LRCH4O75427 683 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 SSTR1P30872 391 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 POLR2BP30876 1174 aaKnown RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 TCF7P36402 384 aaPredicted RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 PGM1P36871 562 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 ARL4CP56559 192 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 DSG1Q02413 1049 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 USP4Q13107 963 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 TFDP1Q14186 410 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 EFTUD2Q15029 972 aaKnown RBP eCLIP18.82■□□□□ 0.63e-6■■■■■ 41.9
SSR4-209ENST00000482902 FNBP1LQ5T0N5 605 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 TAB3Q8N5C8 712 aaPredicted RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 KLHL23Q8NBE8 558 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 PYROXD1Q8WU10 500 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 CPT1BQ92523 772 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 MAF1Q9H063 256 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 NXF1Q9UBU9 619 aaKnown RBP18.82■□□□□ 0.6
SSR4-209ENST00000482902 RABGEF1Q9UJ41 708 aa18.82■□□□□ 0.6
SSR4-209ENST00000482902 KRT7P08729 469 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 HOXC6P09630 235 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 SPATA31D3P0C874 917 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 ANPEPP15144 967 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 LAMTOR4Q0VGL1 99 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 SURF1Q15526 300 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 MSS51Q4VC12 460 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 SPATA31D4Q6ZUB0 917 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 RFX8Q6ZV50 586 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 LRRC6Q86X45 466 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 RNF149Q8NC42 400 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 XYLT2Q9H1B5 865 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 SLC17A7Q9P2U7 560 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 CYTH4Q9UIA0 394 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 POLIQ9UNA4 740 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 EFR3BQ9Y2G0 817 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 AFG3L2Q9Y4W6 797 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 SNCAIPQ9Y6H5 919 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 COMMD3-BMI1R4GMX3 469 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 F8W8V4 182 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 NFKBIEO00221 500 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 PHBP35232 272 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 PSMC1P62191 440 aaKnown RBP18.81■□□□□ 0.6
SSR4-209ENST00000482902 YWHAEP62258 255 aaKnown RBP18.81■□□□□ 0.6
SSR4-209ENST00000482902 ZBTB16Q05516 673 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 HADHQ16836 314 aaKnown RBP18.81■□□□□ 0.6
SSR4-209ENST00000482902 DALRD3Q5D0E6 543 aaKnown RBP18.81■□□□□ 0.6
SSR4-209ENST00000482902 ANGEL2Q5VTE6 544 aaKnown RBP18.81■□□□□ 0.6
SSR4-209ENST00000482902 IER5Q5VY09 327 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 CCDC62Q6P9F0 684 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 TRIM74Q86UV6 250 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 TRIM73Q86UV7 250 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 RHPN2Q8IUC4 686 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 ZBTB8OSQ8IWT0 167 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 THNSL1Q8IYQ7 743 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 KIAA0319LQ8IZA0 1049 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 ATP11CQ8NB49 1132 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 TTC13Q8NBP0 860 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 TCP10LQ8TDR4 215 aa18.81■□□□□ 0.6
SSR4-209ENST00000482902 RSAD2Q8WXG1 361 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms