RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 WRNIP1Q96S55 665 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 INTS2Q9H0H0 1204 aaKnown RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 MLXIPQ9HAP2 919 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 RC3H2Q9HBD1 1191 aaKnown RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 CRIM1Q9NZV1 1036 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 COL20A1Q9P218 1284 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 SUCOQ9UBS9 1254 aaKnown RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 DNAJC12Q9UKB3 198 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 TTC7AQ9ULT0 858 aaPredicted RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 MYH11P35749 1972 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 NCANO14594 1321 aa8.22□□□□□ -1.09
SNX13-208ENST00000482558 ASTN2O75129 1339 aaPredicted RBP8.22□□□□□ -1.09
SNX13-208ENST00000482558 A0A1W2PRQ8 180 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 MEIS3P2A8K0S8 358 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 MIF4GDA9UHW6 222 aaKnown RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 NEMP1O14524 444 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 OPA1O60313 960 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 KPNA6O60684 536 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 SRGAP2O75044 1071 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 SEC31AO94979 1220 aaKnown RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 HTR3BO95264 441 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 MYCLP12524 364 aaPredicted RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 GZMAP12544 262 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 HSPA6P17066 643 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 BPIP17213 487 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 TNFAIP3P21580 790 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 LPOP22079 712 aaPredicted RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 KLRC1P26715 233 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 OAS2P29728 719 aaKnown RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 RECQLP46063 649 aaPredicted RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 NOP2P46087 812 aaKnown RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 GTF2A2P52657 109 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 MFAP3P55082 362 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 SUMO1P63165 101 aaKnown RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 BAATQ14032 418 aaPredicted RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 DRAP1Q14919 205 aaPredicted RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 STXBP2Q15833 593 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 SEPT7Q16181 437 aaKnown RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 XKR3Q5GH77 459 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 MUM1L1Q5H9M0 696 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 TMEM240Q5SV17 173 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 C1QTNF12Q5T7M4 302 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 SNRNP48Q6IEG0 339 aaKnown RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 KCNV1Q6PIU1 500 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 NSMFQ6X4W1 530 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 ZNF771Q7L3S4 317 aaPredicted RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 DEFB132Q7Z7B7 95 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 MYLK4Q86YV6 388 aaPredicted RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 CPA6Q8N4T0 437 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 REPS2Q8NFH8 660 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 OR2W6PQ8NHA6 318 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 SLC30A5Q8TAD4 765 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 NETO1Q8TDF5 533 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 RFFLQ8WZ73 363 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 CAVIN3Q969G5 261 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 PIDD1Q9HB75 910 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 ARHGEF4Q9NR80 690 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 HSPBP1Q9NZL4 362 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 WRAP73Q9P2S5 460 aaPredicted RBP8.21□□□□□ -1.1
SNX13-208ENST00000482558 SLC9A2Q9UBY0 812 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 AMFRQ9UKV5 643 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 TBX20Q9UMR3 447 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 COQ4Q9Y3A0 265 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 CORINQ9Y5Q5 1042 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 IGSF9BQ9UPX0 1349 aa8.21□□□□□ -1.1
SNX13-208ENST00000482558 DDX39AO00148 427 aaKnown RBP8.2□□□□□ -1.1
SNX13-208ENST00000482558 PGRMC1O00264 195 aaKnown RBP8.2□□□□□ -1.1
SNX13-208ENST00000482558 BUB1O43683 1085 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 SNX2O60749 519 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 AGR2O95994 175 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 RNASE1P07998 156 aaKnown RBP8.2□□□□□ -1.1
SNX13-208ENST00000482558 MYBL2P10244 700 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 TGFB3P10600 412 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 ACTN1P12814 892 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 GRK4P32298 578 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 GBP1P32455 592 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 FLT3P36888 993 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 MXI1P50539 228 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 BPIFB4P59827 614 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 CUL1Q13616 776 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 TBC1D10BQ4KMP7 808 aaPredicted RBP8.2□□□□□ -1.1
SNX13-208ENST00000482558 EPC2Q52LR7 807 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 TRIM61Q5EBN2 209 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 NBPF12Q5TAG4 269 aaPredicted RBP8.2□□□□□ -1.1
SNX13-208ENST00000482558 KRT39Q6A163 491 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 SLFN12LQ6IEE8 588 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 NFRKBQ6P4R8 1299 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 PEX26Q7Z412 305 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 LRRC57Q8N9N7 239 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 USP38Q8NB14 1042 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 IL31RAQ8NI17 732 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 CCDC26Q8TAB7 109 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 AENQ8WTP8 325 aaKnown RBP8.2□□□□□ -1.1
SNX13-208ENST00000482558 POF1BQ8WVV4 589 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 ATG4CQ96DT6 458 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 FUBP3Q96I24 572 aaKnown RBP eCLIP8.2□□□□□ -1.1
SNX13-208ENST00000482558 CEP170P1Q96L14 293 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 RUNDC3BQ96NL0 473 aa8.2□□□□□ -1.1
SNX13-208ENST00000482558 PDGFDQ9GZP0 370 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms