RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 LAMB1P07942 1786 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 GOLGA8QA0A0J9YX86 632 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 GOLGA8OA6NCC3 632 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 A6NHS1 94 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 E7ENQ6 273 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 GOLGA8NF8WBI6 632 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 PFDN1O60925 122 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 CYP1A1P04798 512 aaPredicted RBP13.23□□□□□ -0.29
VPS52-218ENST00000482399 GARTP22102 1010 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 DUOXA2Q1HG44 320 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 OLFML2BQ68BL8 750 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 TREML1Q86YW5 311 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 ULK2Q8IYT8 1036 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 CEP70Q8NHQ1 597 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 ATP2A3Q93084 1043 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 STRA6Q9BX79 667 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 VCX3BQ9H321 246 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 HNRNPCL1O60812 293 aaKnown RBP13.22□□□□□ -0.29
VPS52-218ENST00000482399 RALGPS1Q5JS13 557 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 CIAPIN1Q6FI81 312 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 SLFN12LQ6IEE8 588 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 TMPRSS6Q8IU80 811 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 NME8Q8N427 588 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 BANPQ8N9N5 519 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 PHC3Q8NDX5 983 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 B4GALNT2Q8NHY0 566 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 AGAP3Q96P47 875 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 TUBGCP5Q96RT8 1024 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 KLC2Q9H0B6 622 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 VCX3AQ9NNX9 186 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 ZNF302Q9NR11 478 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 PXMP2Q9NR77 195 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 PPM1HQ9ULR3 514 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 E9PBE3 544 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 NOP56O00567 594 aaKnown RBP13.22□□□□□ -0.29
VPS52-218ENST00000482399 ADCY3O60266 1144 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 KLHL41O60662 606 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 APBA3O96018 575 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 DESP17661 470 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 KDELR1P24390 212 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 RBL1P28749 1068 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 GMPRP36959 345 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 MCL1Q07820 350 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 VWA5B1Q5TIE3 1220 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 CWF19L1Q69YN2 538 aaKnown RBP13.22□□□□□ -0.29
VPS52-218ENST00000482399 IYDQ6PHW0 289 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 SLC26A11Q86WA9 606 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 GCNAQ96QF7 691 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 DDX18Q9NVP1 670 aaKnown RBP13.22□□□□□ -0.29
VPS52-218ENST00000482399 USP18Q9UMW8 372 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 UBIAD1Q9Y5Z9 338 aa13.22□□□□□ -0.29
VPS52-218ENST00000482399 DCAF8L1A6NGE4 600 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 CXorf49A8MYA2 514 aaPredicted RBP13.21□□□□□ -0.29
VPS52-218ENST00000482399 LRCH4O75427 683 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 C4BPAP04003 597 aaKnown RBP13.21□□□□□ -0.29
VPS52-218ENST00000482399 GJB1P08034 283 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 HMGCS2P54868 508 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 PTPN20Q4JDL3 420 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 TTC39BQ5VTQ0 682 aaPredicted RBP13.21□□□□□ -0.29
VPS52-218ENST00000482399 FAM151AQ8WW52 585 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 CLMNQ96JQ2 1002 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 DHX35Q9H5Z1 703 aaKnown RBP13.21□□□□□ -0.29
VPS52-218ENST00000482399 RHBDL2Q9NX52 303 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 H0YCG3 227 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 LYNP07948 512 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 ADGRD1Q6QNK2 874 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 UNC5BQ8IZJ1 945 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 DEFB107AQ8IZN7 70 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 WNK4Q96J92 1243 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 PHACTR1Q9C0D0 580 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 FAM49BQ9NUQ9 324 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 TAGLN3Q9UI15 199 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 ZNRF3Q9ULT6 936 aa13.21□□□□□ -0.29
VPS52-218ENST00000482399 ZC3H11AO75152 810 aaKnown RBP eCLIP13.21□□□□□ -0.3
VPS52-218ENST00000482399 LDHAP00338 332 aaKnown RBP13.21□□□□□ -0.3
VPS52-218ENST00000482399 ITGAVP06756 1048 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 FESP07332 822 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 MAP7Q14244 749 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 TRMT10BQ6PF06 316 aaKnown RBP13.21□□□□□ -0.3
VPS52-218ENST00000482399 TRIM50Q86XT4 487 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 PHF13Q86YI8 300 aaPredicted RBP13.21□□□□□ -0.3
VPS52-218ENST00000482399 MAP7D3Q8IWC1 876 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 KBTBD2Q8IY47 623 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 NSUN6Q8TEA1 469 aaKnown RBP13.21□□□□□ -0.3
VPS52-218ENST00000482399 FAM149B1Q96BN6 582 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 ANKRD36BP1Q96IX9 119 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 UNKQ9C0B0 810 aaKnown RBP13.21□□□□□ -0.3
VPS52-218ENST00000482399 KANSL3Q9P2N6 904 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 STX18Q9P2W9 335 aaKnown RBP13.21□□□□□ -0.3
VPS52-218ENST00000482399 SLC7A8Q9UHI5 535 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 ATRNL1Q5VV63 1379 aa13.21□□□□□ -0.3
VPS52-218ENST00000482399 IRF6O14896 467 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms