RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ASGR2P07307 311 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 RPL34P49207 117 aaKnown RBP12.91□□□□□ -0.34
TRA2B-212ENST00000480461 CLCN5P51795 746 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 ADKP55263 362 aaKnown RBP12.91□□□□□ -0.34
TRA2B-212ENST00000480461 BPIFB4P59827 614 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 FMO1Q01740 532 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 RAB41Q5JT25 222 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 ATAT1Q5SQI0 421 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 HGSNATQ68CP4 663 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 WDR59Q6PJI9 974 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 CYP26C1Q6V0L0 522 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 TMC6Q7Z403 805 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 PASD1Q8IV76 773 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 NUP93Q8N1F7 819 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 NDRG1Q92597 394 aaKnown RBP12.91□□□□□ -0.34
TRA2B-212ENST00000480461 TTLL2Q9BWV7 592 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 LHX5Q9H2C1 402 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 MFSD1Q9H3U5 465 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 PIDD1Q9HB75 910 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
TRA2B-212ENST00000480461 TJP2Q9UDY2 1190 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 CHORDC1Q9UHD1 332 aaPredicted RBP12.91□□□□□ -0.34
TRA2B-212ENST00000480461 MAGED2Q9UNF1 606 aaPredicted RBP12.91□□□□□ -0.34
TRA2B-212ENST00000480461 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 USP3Q9Y6I4 520 aa12.91□□□□□ -0.34
TRA2B-212ENST00000480461 EP300Q09472 2414 aaPredicted RBP12.91□□□□□ -0.34
TRA2B-212ENST00000480461 PTPRDP23468 1912 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 FAM92AA1XBS5 289 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 M0QYV0 167 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 PIK3R2O00459 728 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 XPO1O14980 1071 aaKnown RBP12.9□□□□□ -0.34
TRA2B-212ENST00000480461 XYLBO75191 536 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 TADA3O75528 432 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 TPM3P06753 285 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 MYL4P12829 197 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 KRT9P35527 623 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 RGS7P49802 495 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 KIF11P52732 1056 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 SLC5A3P53794 718 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 BCAT1P54687 386 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 ZBED6P86452 979 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 CDR2Q01850 454 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 BST2Q10589 180 aaKnown RBP12.9□□□□□ -0.34
TRA2B-212ENST00000480461 PLD1Q13393 1074 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 STILQ15468 1287 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 SFMBT2Q5VUG0 894 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 CES5AQ6NT32 575 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 ELMSAN1Q6PJG2 1045 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 DENND5BQ6ZUT9 1274 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 BHLHA9Q7RTU4 235 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 ZNF571Q7Z3V5 609 aaPredicted RBP12.9□□□□□ -0.34
TRA2B-212ENST00000480461 SHKBP1Q8TBC3 707 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 TRMT2BQ96GJ1 504 aaKnown RBP12.9□□□□□ -0.34
TRA2B-212ENST00000480461 ZSWIM3Q96MP5 696 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 NECTIN4Q96NY8 510 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 SLC4A5Q9BY07 1137 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 DNAI2Q9GZS0 605 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 AVENQ9NQS1 362 aaPredicted RBP12.9□□□□□ -0.34
TRA2B-212ENST00000480461 HESX1Q9UBX0 185 aa12.9□□□□□ -0.34
TRA2B-212ENST00000480461 LUC7L2Q9Y383 392 aaKnown RBP12.9□□□□□ -0.34
TRA2B-212ENST00000480461 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.9□□□□□ -0.342e-8■□□□□ 10.6
TRA2B-212ENST00000480461 ATP8B3O60423 1300 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 FRYLO94915 3013 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 MED7O43513 233 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 PLEKP08567 350 aaPredicted RBP12.89□□□□□ -0.35
TRA2B-212ENST00000480461 CSH1P0DML2 217 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 CSH2P0DML3 217 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 FERP16591 822 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 ANXA13P27216 316 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 HNRNPH3P31942 346 aaKnown RBP12.89□□□□□ -0.35
TRA2B-212ENST00000480461 PRKCIP41743 596 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 PLA2G4AP47712 749 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 TAF10Q12962 218 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 ANGPT1Q15389 498 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 PABPC1LQ4VXU2 614 aaKnown RBP12.89□□□□□ -0.35
TRA2B-212ENST00000480461 STXBP5Q5T5C0 1151 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 DGLUCYQ7Z3D6 616 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 SCD5Q86SK9 330 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 ITIH5Q86UX2 942 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 TDRD5Q8NAT2 981 aaKnown RBP12.89□□□□□ -0.35
TRA2B-212ENST00000480461 FLCNQ8NFG4 579 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 ST13P5Q8NFI4 369 aaPredicted RBP12.89□□□□□ -0.35
TRA2B-212ENST00000480461 KCTD13Q8WZ19 329 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
TRA2B-212ENST00000480461 CEP295NLQ96MC4 621 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 MYADMQ96S97 322 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 DNAJC7Q99615 494 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 AGPAT1Q99943 283 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 HAUS4Q9H6D7 363 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 GRPEL1Q9HAV7 217 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 OSER1Q9NX31 292 aa12.89□□□□□ -0.35
TRA2B-212ENST00000480461 A0A1W2PRU2 124 aa12.88□□□□□ -0.35
TRA2B-212ENST00000480461 KRT37O76014 449 aa12.88□□□□□ -0.35
TRA2B-212ENST00000480461 CYP1A1P04798 512 aaPredicted RBP12.88□□□□□ -0.35
TRA2B-212ENST00000480461 USP17L7P0C7H9 530 aa12.88□□□□□ -0.35
TRA2B-212ENST00000480461 ZDHHC11BP0C7U3 371 aa12.88□□□□□ -0.35
TRA2B-212ENST00000480461 SETSIPP0DME0 302 aa12.88□□□□□ -0.35
TRA2B-212ENST00000480461 CEBPBP17676 345 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms