RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SMC1AQ14683 1233 aaKnown RBP18.46■□□□□ 0.55
UPF3A-206ENST00000480362 EFHC1Q5JVL4 640 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 PLPP4Q5VZY2 271 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 C11orf63Q6NUN7 778 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 TDHQ8IZJ6 230 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 NUP93Q8N1F7 819 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 EMC1Q8N766 993 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 MRPL43Q8N983 215 aaKnown RBP18.46■□□□□ 0.55
UPF3A-206ENST00000480362 MICAL1Q8TDZ2 1067 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 CERS4Q9HA82 394 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 CYP4F11Q9HBI6 524 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 NGRNQ9NPE2 291 aaKnown RBP18.46■□□□□ 0.55
UPF3A-206ENST00000480362 IP6K2Q9UHH9 426 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 JRKLQ9Y4A0 524 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 IRAK3Q9Y616 596 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 ALG6Q9Y672 507 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 USP3Q9Y6I4 520 aa18.46■□□□□ 0.55
UPF3A-206ENST00000480362 CTAGE9A4FU28 777 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 C2orf71A6NGG8 1288 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 H3BNC9 293 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 FSCN2O14926 492 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 PROSCO94903 275 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 ELF1P32519 619 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 SLC5A3P53794 718 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 IFRD2Q12894 506 aaPredicted RBP18.45■□□□□ 0.54
UPF3A-206ENST00000480362 CAMK1Q14012 370 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 PTPROQ16827 1216 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 PM20D1Q6GTS8 502 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 SLC26A9Q7LBE3 791 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 PEX26Q7Z412 305 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 SCML4Q8N228 414 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 KIF18AQ8NI77 898 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 SCAMP5Q8TAC9 235 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 GPR152Q8TDT2 470 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 NAPGQ99747 312 aaPredicted RBP18.45■□□□□ 0.54
UPF3A-206ENST00000480362 EMILIN2Q9BXX0 1053 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 HSFX1Q9UBD0 423 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 AMFRQ9UKV5 643 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 HYOU1Q9Y4L1 999 aa18.45■□□□□ 0.54
UPF3A-206ENST00000480362 HIDE1A8MVS5 230 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 ENC1O14682 589 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 NCK2O43639 380 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 LPXNO60711 386 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 COMTP21964 271 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 KLRC2P26717 231 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 IRS1P35568 1242 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 FLT3P36888 993 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 ZNF252P-AS1Q0IIN9 211 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 MEI1Q5TIA1 1274 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 PPP2R2DQ66LE6 453 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 NT5DC3Q86UY8 548 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 CPNE8Q86YQ8 564 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 STKLD1Q8NE28 680 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 GIPC2Q8TF65 315 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 RXFP2Q8WXD0 754 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 FAM149B1Q96BN6 582 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 SPATA17Q96L03 361 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 SLC28A3Q9HAS3 691 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 ASNSD1Q9NWL6 643 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 LCMT1Q9UIC8 334 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 MAFFQ9ULX9 164 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 PATJQ8NI35 1801 aa18.44■□□□□ 0.54
UPF3A-206ENST00000480362 C2CD4BA6NLJ0 364 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 YJEFN3A6XGL0 299 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 E7ENQ6 273 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 PRRG1O14668 218 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 SART1O43290 800 aaKnown RBP18.43■□□□□ 0.54
UPF3A-206ENST00000480362 TGM5O43548 720 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 HSF2BPO75031 334 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 ATP1A1P05023 1023 aaKnown RBP18.43■□□□□ 0.54
UPF3A-206ENST00000480362 ADH1AP07327 375 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 GLI1P08151 1106 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 SPATA31D3P0C874 917 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 PDGFRAP16234 1089 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 ATF6P18850 670 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 GPD1P21695 349 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 PSMA2P25787 234 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 YWHAZP63104 245 aaKnown RBP18.43■□□□□ 0.54
UPF3A-206ENST00000480362 PIGHQ14442 188 aaPredicted RBP18.43■□□□□ 0.54
UPF3A-206ENST00000480362 TRNP1Q6NT89 227 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 SPATA31D4Q6ZUB0 917 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 DENND5BQ6ZUT9 1274 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 HFE2Q6ZVN8 426 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 ARCQ7LC44 396 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 TCEAL8Q8IYN2 117 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 FNIP1Q8TF40 1166 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 IRGQQ8WZA9 623 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 TLR10Q9BXR5 811 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 IL37Q9NZH6 218 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 PACSIN2Q9UNF0 486 aaPredicted RBP18.43■□□□□ 0.54
UPF3A-206ENST00000480362 USTQ9Y2C2 406 aa18.43■□□□□ 0.54
UPF3A-206ENST00000480362 SLC38A8A6NNN8 435 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 SPOPO43791 374 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 RTN3O95197 1032 aaPredicted RBP18.42■□□□□ 0.54
UPF3A-206ENST00000480362 SLC1A1P43005 524 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 ALDH1A3P47895 512 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 ZNF143P52747 638 aaPredicted RBP18.42■□□□□ 0.54
UPF3A-206ENST00000480362 USP46P62068 366 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 MTMR3Q13615 1198 aa18.42■□□□□ 0.54
UPF3A-206ENST00000480362 PDE12Q6L8Q7 609 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms