RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 BICD1Q96G01 975 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 BORCS6Q96GS4 357 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF560Q96MR9 790 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 CLSTN3Q9BQT9 956 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 WDR6Q9NNW5 1121 aaKnown RBP5.28□□□□□ -1.56
PTCD3-213ENST00000480102 AGPAT3Q9NRZ7 376 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 CHMP5Q9NZZ3 219 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 AFF4Q9UHB7 1163 aaKnown RBP5.28□□□□□ -1.56
PTCD3-213ENST00000480102 FBXW11Q9UKB1 542 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ASB3Q9Y575 518 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 NPHP3-ACAD11A0A0J9YXS1 232 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 LACTBL1A8MY62 500 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ANKRD63C9JTQ0 380 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 GABRDO14764 452 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 RNGTTO60942 597 aaKnown RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 TACC1O75410 805 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 SMC2O95347 1197 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 FGF19O95750 216 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 CXCL8P10145 99 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ODC1P11926 461 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 IDEP14735 1019 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PFKLP17858 780 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 RPL13P26373 211 aaKnown RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 KLRC2P26717 231 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ANP32AP39687 249 aaKnown RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PBX3P40426 434 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 LHX1P48742 406 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 TAF6P49848 677 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 CASP5P51878 434 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 NDUFA8P51970 172 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 UBE2HP62256 183 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 LRRC63Q05C16 580 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 RING1Q06587 406 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 DLX2Q07687 328 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 RAD51AP2Q09MP3 1159 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 STK4Q13043 487 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 CDK5R2Q13319 367 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PLD1Q13393 1074 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 CUL4BQ13620 913 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 SCN5AQ14524 2016 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 TMEM132DQ14C87 1099 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 CCDC85BQ15834 202 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PSMD5Q16401 504 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 SNRNP35Q16560 246 aaKnown RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 NFE2Q16621 373 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 RALGAPA2Q2PPJ7 1873 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 CFAP221Q4G0U5 840 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ZCWPW2Q504Y3 356 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ZC2HC1CQ53FD0 456 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 RTP2Q5QGT7 225 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 FAM171A1Q5VUB5 890 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PLPP4Q5VZY2 271 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 C9orf57Q5W0N0 161 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ARMCX5Q6P1M9 558 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 OGFOD3Q6PK18 319 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ADGRD2Q7Z7M1 963 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 CDR2LQ86X02 465 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 UBALD2Q8IYN6 164 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 SYCP3Q8IZU3 236 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PDILTQ8N807 584 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 KIAA0895Q8NCT3 520 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 RIN2Q8WYP3 895 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ISL2Q96A47 359 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ZNF707Q96C28 371 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 FUBP3Q96I24 572 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 ZBTB45Q96K62 511 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PLIN2Q99541 437 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 GPR88Q9GZN0 384 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 KCTD10Q9H3F6 313 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 EXOC1Q9NV70 894 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 INTS13Q9NVM9 706 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 RBAKQ9NYW8 714 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 GDE1Q9NZC3 331 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 IGSF9Q9P2J2 1179 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 EPS15L1Q9UBC2 864 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PCOLCE2Q9UKZ9 415 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 GDAQ9Y2T3 454 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PRG3Q9Y2Y8 225 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 USP15Q9Y4E8 981 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 NUB1Q9Y5A7 615 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 NCOR1O75376 2440 aa5.27□□□□□ -1.57
PTCD3-213ENST00000480102 PRRC2BQ5JSZ5 2229 aaKnown RBP5.27□□□□□ -1.57
PTCD3-213ENST00000480102 A0A1B0GVL5 298 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 GOLGA6L4A6NEF3 574 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 CASTOR2A6NHX0 329 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 PRR33A8MZF0 331 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 KPNA7A9QM74 516 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 NT5C1B-RDH14C9J2C7 533 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 SCAMP3O14828 347 aaKnown RBP5.26□□□□□ -1.57
PTCD3-213ENST00000480102 SLC16A3O15427 465 aaKnown RBP5.26□□□□□ -1.57
PTCD3-213ENST00000480102 TGM5O43548 720 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 MYBP10242 640 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 PCSK1P29120 753 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 NTF4P34130 210 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 MAGEA11P43364 429 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 GP2P55259 537 aaKnown RBP5.26□□□□□ -1.57
PTCD3-213ENST00000480102 RBP5P82980 135 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 TFF2Q03403 129 aa5.26□□□□□ -1.57
PTCD3-213ENST00000480102 YWHAHQ04917 246 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms