RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 ARFGAP1Q8N6T3 406 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 HAPLN2Q9GZV7 340 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 RAVER2Q9HCJ3 691 aaKnown RBP21.56■■□□□ 1.04
COL13A1-208ENST00000479733 ANKEF1Q9NU02 776 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 STK32BQ9NY57 414 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 SEPT9Q9UHD8 586 aaPredicted RBP21.56■■□□□ 1.04
COL13A1-208ENST00000479733 POLIQ9UNA4 740 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 TOM1L1O75674 476 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 MROH9Q5TGP6 573 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 TTC39BQ5VTQ0 682 aaPredicted RBP21.56■■□□□ 1.04
COL13A1-208ENST00000479733 CC2D2BQ6DHV5 1058 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 DENND5BQ6ZUT9 1274 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 DHDDSQ86SQ9 333 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 PPP1R14CQ8TAE6 165 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 FAF2Q96CS3 445 aa21.56■■□□□ 1.04
COL13A1-208ENST00000479733 NTPCRQ9BSD7 190 aaKnown RBP21.56■■□□□ 1.04
COL13A1-208ENST00000479733 A0A0B4J269 797 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 LRCH4O75427 683 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 LYPLA1O75608 230 aaPredicted RBP21.55■■□□□ 1.04
COL13A1-208ENST00000479733 KDELR1P24390 212 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 STIP1P31948 543 aaKnown RBP21.55■■□□□ 1.04
COL13A1-208ENST00000479733 MMEL1Q495T6 779 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 SPATA24Q86W54 205 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 PDSS2Q86YH6 399 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 SAMD3Q8N6K7 520 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 NAT14Q8WUY8 206 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 POLR3FQ9H1D9 316 aaPredicted RBP21.55■■□□□ 1.04
COL13A1-208ENST00000479733 LMCD1Q9NZU5 365 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 MMRN1Q13201 1228 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 EFHC1Q5JVL4 640 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 SWSAP1Q6NVH7 229 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 WDTC1Q8N5D0 677 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 TMEM35BQ8NCS4 154 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 GDPD5Q8WTR4 605 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 FAM172AQ8WUF8 416 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 DNAJC1Q96KC8 554 aaKnown RBP21.55■■□□□ 1.04
COL13A1-208ENST00000479733 C7orf26Q96N11 449 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 SOX13Q9UN79 622 aa21.55■■□□□ 1.04
COL13A1-208ENST00000479733 LOC100653049A0A140TA62 436 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 KRT34O76011 436 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 KRT37O76014 449 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 SNRPAP09012 282 aaKnown RBP21.54■■□□□ 1.04
COL13A1-208ENST00000479733 LSAMPQ13449 338 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 DGKZQ13574 1117 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 TRIP10Q15642 601 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 TMCO4Q5TGY1 634 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 BBS12Q6ZW61 710 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 ACAD11Q709F0 780 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 SYTL5Q8TDW5 730 aaPredicted RBP21.54■■□□□ 1.04
COL13A1-208ENST00000479733 CLEC4DQ8WXI8 215 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 TMEM143Q96AN5 459 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 HIC2Q96JB3 615 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 XPNPEP1Q9NQW7 623 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 RAB6BQ9NRW1 208 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 TEX264Q9Y6I9 313 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 TCRBV5S1A1TA0A578 114 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 MCF2LO15068 1137 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 MSLNQ13421 630 aaPredicted RBP21.54■■□□□ 1.04
COL13A1-208ENST00000479733 SMAD1Q15797 465 aaKnown RBP21.54■■□□□ 1.04
COL13A1-208ENST00000479733 TCHHL1Q5QJ38 904 aaPredicted RBP21.54■■□□□ 1.04
COL13A1-208ENST00000479733 RSPH3Q86UC2 560 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 NDUFAF2Q8N183 169 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 OLFM3Q96PB7 478 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 PREBQ9HCU5 417 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 HBS1LQ9Y450 684 aaKnown RBP21.54■■□□□ 1.04
COL13A1-208ENST00000479733 COMMD3-BMI1R4GMX3 469 aa21.54■■□□□ 1.04
COL13A1-208ENST00000479733 ZNF536O15090 1300 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 CCDC160A6NGH7 325 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 KLF11O14901 512 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 PROCP04070 461 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 KRT3P12035 628 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 VCLP18206 1134 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 RPS6P62753 249 aaKnown RBP21.53■■□□□ 1.04
COL13A1-208ENST00000479733 MTERF2Q49AM1 385 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 FAM91A1Q658Y4 838 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 TFAP2BQ92481 460 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 TARS2Q9BW92 718 aaKnown RBP21.53■■□□□ 1.04
COL13A1-208ENST00000479733 ITGBL1O95965 494 aaPredicted RBP21.53■■□□□ 1.04
COL13A1-208ENST00000479733 CPOXP36551 454 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 SLC25A11Q02978 314 aaKnown RBP21.53■■□□□ 1.04
COL13A1-208ENST00000479733 GRAMD1BQ3KR37 738 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 TTC13Q8NBP0 860 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.53■■□□□ 1.04
COL13A1-208ENST00000479733 NCSTNQ92542 709 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 MPP4Q96JB8 637 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 RMDN3Q96TC7 470 aa21.53■■□□□ 1.04
COL13A1-208ENST00000479733 ZC3H7BQ9UGR2 993 aaKnown RBP21.53■■□□□ 1.04
COL13A1-208ENST00000479733 FKBP6O75344 327 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 ZMPSTE24O75844 475 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 TBXAS1P24557 533 aaPredicted RBP21.52■■□□□ 1.04
COL13A1-208ENST00000479733 PTPN7P35236 360 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 JAK3P52333 1124 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 STX3Q13277 289 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 STRIP1Q5VSL9 837 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 C16orf46Q6P387 395 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 C1orf228Q6PIY5 440 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 MSTO1Q9BUK6 570 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 SMYD2Q9NRG4 433 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 PACSIN3Q9UKS6 424 aa21.52■■□□□ 1.04
COL13A1-208ENST00000479733 ZNF831Q5JPB2 1677 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms