RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MRPL44Q9H9J2 332 aaKnown RBP17.16■□□□□ 0.34
DDX56-210ENST00000479440 APOBEC2Q9Y235 224 aaKnown RBP17.16■□□□□ 0.34
DDX56-210ENST00000479440 ADAMTS20P59510 1910 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 E2F8A0AVK6 867 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 EIF4E1BA6NMX2 242 aaKnown RBP17.15■□□□□ 0.34
DDX56-210ENST00000479440 HOXC11O43248 304 aaPredicted RBP17.15■□□□□ 0.34
DDX56-210ENST00000479440 SH3BP5O60239 455 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 ATP2C2O75185 946 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 BMP15O95972 392 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 PLEKHG6Q3KR16 790 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 LY6G5CQ5SRR4 150 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 C10orf76Q5T2E6 689 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 ETFBKMTQ8IXQ9 262 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 TERB1Q8NA31 727 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 PDZD8Q8NEN9 1154 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 OR2I1PQ8NGU4 316 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 KBTBD7Q8WVZ9 684 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 PCED1BQ96HM7 432 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 C8orf48Q96LL4 319 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 CRTAC1Q9NQ79 661 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 SIX4Q9UIU6 781 aa17.15■□□□□ 0.34
DDX56-210ENST00000479440 F8VP50 259 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 H3BQV1 296 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 GCNT3O95395 438 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 TNNC2P02585 160 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 GNSP15586 552 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 WARSP23381 471 aaKnown RBP17.14■□□□□ 0.33
DDX56-210ENST00000479440 NTSR1P30989 418 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 TAF10Q12962 218 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 SYCP2LQ5T4T6 812 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 CCNI2Q6ZMN8 369 aaPredicted RBP17.14■□□□□ 0.33
DDX56-210ENST00000479440 DYMQ7RTS9 669 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 SLC41A1Q8IVJ1 513 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 RGL4Q8IZJ4 473 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 TRIML1Q8N9V2 468 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 MYCBPAPQ8TBZ2 947 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
DDX56-210ENST00000479440 FOXJ1Q92949 421 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 HPDLQ96IR7 371 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 CAMK1GQ96NX5 476 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 ZDHHC5Q9C0B5 715 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 DEC1Q9P2X7 70 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 CYP8B1Q9UNU6 501 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 SH3BP1Q9Y3L3 701 aa17.14■□□□□ 0.33
DDX56-210ENST00000479440 NDUFS2O75306 463 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 TULP3O75386 442 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 GJB3O75712 270 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 GAP43P17677 238 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 LMO2P25791 158 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 ALCAMQ13740 583 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 MDH1BQ5I0G3 518 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 SDE2Q6IQ49 451 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 LIMS2Q7Z4I7 341 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 SPRYD3Q8NCJ5 442 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 OVCA2Q8WZ82 227 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
DDX56-210ENST00000479440 STRA6Q9BX79 667 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 ELOVL4Q9GZR5 314 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
DDX56-210ENST00000479440 FASNP49327 2511 aaKnown RBP17.13■□□□□ 0.33
DDX56-210ENST00000479440 GOLGA8IPA6NC78 632 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 GOLGA8JA6NMD2 632 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 PDGFRBP09619 1106 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 NDUFV2P19404 249 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 KCNA1Q09470 495 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 IFRD2Q12894 506 aaPredicted RBP17.12■□□□□ 0.33
DDX56-210ENST00000479440 WDR45BQ5MNZ6 344 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 HS2ST1Q7LGA3 356 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 NAT16Q8N8M0 369 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 ZSWIM2Q8NEG5 633 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 FAM84AQ96KN4 292 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 MMS19Q96T76 1030 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 SNX25Q9H3E2 840 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 SPHK2Q9NRA0 654 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 STK17AQ9UEE5 414 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 STARD13Q9Y3M8 1113 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 PCDHB13Q9Y5F0 798 aa17.12■□□□□ 0.33
DDX56-210ENST00000479440 ADAMTS9Q9P2N4 1935 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 A0A1W2PQF6 199 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 KIAA0391O15091 583 aaKnown RBP17.11■□□□□ 0.33
DDX56-210ENST00000479440 RTN3O95197 1032 aaPredicted RBP17.11■□□□□ 0.33
DDX56-210ENST00000479440 YWHAQP27348 245 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 WASP42768 502 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 GRIK2Q13002 908 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 SURF1Q15526 300 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 ANO4Q32M45 955 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 SCARA3Q6AZY7 606 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 GRAMD4Q6IC98 578 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 GLRX5Q86SX6 157 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 CHPFQ8IZ52 775 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 GPD1LQ8N335 351 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 PNPLA1Q8N8W4 532 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 IPO4Q8TEX9 1081 aaKnown RBP17.11■□□□□ 0.33
DDX56-210ENST00000479440 FBXO32Q969P5 355 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 CBWD1Q9BRT8 395 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 OLFML3Q9NRN5 406 aa17.11■□□□□ 0.33
DDX56-210ENST00000479440 INTS13Q9NVM9 706 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms