RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 COBLL1Q53SF7 1204 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 UBE2Q1Q7Z7E8 422 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 CLNKQ7Z7G1 428 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 FAM46DQ8NEK8 389 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 ANKS1AQ92625 1134 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 SUCLG2Q96I99 432 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 TRIM54Q9BYV2 358 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 GPRC5BQ9NZH0 403 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 PLEKHM1Q9Y4G2 1056 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 ASH1LQ9NR48 2969 aaKnown RBP6.13□□□□□ -1.43
CCDC171-207ENST00000478913 C4AP0C0L4 1744 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 AKAP11Q9UKA4 1901 aa6.13□□□□□ -1.43
CCDC171-207ENST00000478913 TPRP12270 2363 aaKnown RBP6.13□□□□□ -1.43
CCDC171-207ENST00000478913 UNC119BA6NIH7 251 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 TMEM200CA6NKL6 621 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 MATN3O15232 486 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 VPS4BO75351 444 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 NCOR1O75376 2440 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 GRPP07492 148 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 C4BP0C0L5 1744 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 PIM1P11309 404 aaPredicted RBP6.12□□□□□ -1.43
CCDC171-207ENST00000478913 TRIM27P14373 513 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 BRAFP15056 766 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 ARFIP2P53365 341 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 GUCY1B3Q02153 619 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 SAFBQ15424 915 aaKnown RBP eCLIP6.12□□□□□ -1.43
CCDC171-207ENST00000478913 PREPLQ4J6C6 727 aaPredicted RBP6.12□□□□□ -1.43
CCDC171-207ENST00000478913 FAM160B1Q5W0V3 765 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 SLC30A10Q6XR72 485 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 RASAL3Q86YV0 1011 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 NAV2Q8IVL1 2488 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 ZNF483Q8TF39 744 aaPredicted RBP6.12□□□□□ -1.43
CCDC171-207ENST00000478913 LENG9Q96B70 501 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 ADAM2Q99965 735 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 ZNF747Q9BV97 191 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 TTYH1Q9H313 450 aaPredicted RBP6.12□□□□□ -1.43
CCDC171-207ENST00000478913 YTHDC2Q9H6S0 1430 aaKnown RBP6.12□□□□□ -1.43
CCDC171-207ENST00000478913 GALNT9Q9HCQ5 603 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 MRPS18AQ9NVS2 196 aaKnown RBP6.12□□□□□ -1.43
CCDC171-207ENST00000478913 ETAA1Q9NY74 926 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 VSX1Q9NZR4 365 aaPredicted RBP6.12□□□□□ -1.43
CCDC171-207ENST00000478913 CTTNBP2NLQ9P2B4 639 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 OGDHLQ9ULD0 1010 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 TOGARAM1Q9Y4F4 1720 aa6.12□□□□□ -1.43
CCDC171-207ENST00000478913 C5P01031 1676 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 IQGAP3Q86VI3 1631 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 CEP162Q5TB80 1403 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 ANKARQ7Z5J8 1434 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 ABCC11Q96J66 1382 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 A0A1W2PS29 197 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 ISM1B1AKI9 464 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 MYO1CO00159 1063 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 MYO1FO00160 1098 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 TBX3O15119 743 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 TBC1D4O60343 1298 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 LPXNO60711 386 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 PQBP1O60828 265 aaKnown RBP6.11□□□□□ -1.43
CCDC171-207ENST00000478913 MAP4K4O95819 1239 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-207ENST00000478913 ABHD16AO95870 558 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 FOSP01100 380 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-207ENST00000478913 THP07101 528 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 MYF5P13349 255 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 CHRM3P20309 590 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 SUMO3P55854 103 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-207ENST00000478913 CYP2A13Q16696 494 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 GEN1Q17RS7 908 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 AMOTQ4VCS5 1084 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 LMBRD2Q68DH5 695 aaPredicted RBP6.11□□□□□ -1.43
CCDC171-207ENST00000478913 KCNV1Q6PIU1 500 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 PPP1R32Q7Z5V6 425 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 CCDC146Q8IYE0 955 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 PSD4Q8NDX1 1056 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 TMEM125Q96AQ2 219 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 APIPQ96GX9 242 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 BOD1Q96IK1 185 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 HNRNPABQ99729 332 aaKnown RBP6.11□□□□□ -1.43
CCDC171-207ENST00000478913 APOL5Q9BWW9 433 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 NUP62CLQ9H1M0 184 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 KIAA1586Q9HCI6 787 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 WNK3Q9BYP7 1800 aa6.11□□□□□ -1.43
CCDC171-207ENST00000478913 USP9XQ93008 2570 aaPredicted RBP6.1□□□□□ -1.43
CCDC171-207ENST00000478913 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 PRAMEF33A0A0G2JMD5 474 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 CENPVL1A0A0U1RR11 272 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 NPIPB8E9PQR5 432 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 BTN3A1O00481 513 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 PRAMEF10O60809 474 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 SUN1O94901 812 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 ZFPL1O95159 310 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 NBPF7P0C2Y1 421 aaPredicted RBP6.1□□□□□ -1.43
CCDC171-207ENST00000478913 PHKG2P15735 406 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 MAKP20794 623 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 ANXA11P50995 505 aaKnown RBP6.1□□□□□ -1.43
CCDC171-207ENST00000478913 RPS7P62081 194 aaKnown RBP6.1□□□□□ -1.43
CCDC171-207ENST00000478913 MC2RQ01718 297 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 FPGSQ05932 587 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 TCF15Q12870 199 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 SLC13A2Q13183 592 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 RAB32Q13637 225 aa6.1□□□□□ -1.43
CCDC171-207ENST00000478913 CNGA2Q16280 664 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms