RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 MYO1EQ12965 1108 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 COL28A1Q2UY09 1125 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 PREPLQ4J6C6 727 aaPredicted RBP18.32■□□□□ 0.52
VIM-204ENST00000478746 TDRD10Q5VZ19 366 aaKnown RBP18.32■□□□□ 0.52
VIM-204ENST00000478746 BTBD8Q5XKL5 378 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 NUDT18Q6ZVK8 323 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 DYMQ7RTS9 669 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 ZNF513Q8N8E2 541 aaPredicted RBP18.32■□□□□ 0.52
VIM-204ENST00000478746 NAT16Q8N8M0 369 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 ADAMTS14Q8WXS8 1223 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 ACCSQ96QU6 501 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 STRA6Q9BX79 667 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 MRPL44Q9H9J2 332 aaKnown RBP18.32■□□□□ 0.52
VIM-204ENST00000478746 PDE11AQ9HCR9 933 aa18.32■□□□□ 0.52
VIM-204ENST00000478746 GCN1Q92616 2671 aaKnown RBP18.31■□□□□ 0.52
VIM-204ENST00000478746 A0A1W2PQD8 194 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 GOLGA8IPA6NC78 632 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 GOLGA8JA6NMD2 632 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 PPP1R37O75864 691 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 OAS1P00973 400 aaKnown RBP18.31■□□□□ 0.52
VIM-204ENST00000478746 TMEM191BP0C7N4 346 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 TAF10Q12962 218 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 LIMS2Q7Z4I7 341 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 PHTF2Q8N3S3 785 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 PNPLA1Q8N8W4 532 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 TRIML1Q8N9V2 468 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 NOC3LQ8WTT2 800 aaKnown RBP18.31■□□□□ 0.52
VIM-204ENST00000478746 KBTBD7Q8WVZ9 684 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 HPDLQ96IR7 371 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 MTMR12Q9C0I1 747 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 CALCOCO1Q9P1Z2 691 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 DEC1Q9P2X7 70 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 IGSF10Q6WRI0 2623 aa18.31■□□□□ 0.52
VIM-204ENST00000478746 PCDH15Q96QU1 1955 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 IGHV1OR15-9A0A0B4J2B8 117 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 E2F8A0AVK6 867 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 F8VP50 259 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 ZNF217O75362 1048 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 FTH1P19P0C7X4 201 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 HOXB2P14652 356 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 GARTP22102 1010 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 NTSR1P30989 418 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 LONP1P36776 959 aaKnown RBP18.3■□□□□ 0.52
VIM-204ENST00000478746 WASP42768 502 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 PLEKHG6Q3KR16 790 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 L1TD1Q5T7N2 865 aaKnown RBP18.3■□□□□ 0.52
VIM-204ENST00000478746 CCNI2Q6ZMN8 369 aaPredicted RBP18.3■□□□□ 0.52
VIM-204ENST00000478746 SLC41A1Q8IVJ1 513 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 RGL4Q8IZJ4 473 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 MYCBPAPQ8TBZ2 947 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 OTUB2Q96DC9 234 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 PCED1BQ96HM7 432 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 ANKRD36BP1Q96IX9 119 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 C8orf48Q96LL4 319 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 HSPA12BQ96MM6 686 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 SLITRK1Q96PX8 696 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 FAM124BQ9H5Z6 455 aaPredicted RBP18.3■□□□□ 0.52
VIM-204ENST00000478746 TBC1D7Q9P0N9 293 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 SEL1LQ9UBV2 794 aa18.3■□□□□ 0.52
VIM-204ENST00000478746 LOC400499M0QZD8 3231 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 H3BQV1 296 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 TULP3O75386 442 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 C10orf76Q5T2E6 689 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 HS2ST1Q7LGA3 356 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 ETFBKMTQ8IXQ9 262 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 SYCP3Q8IZU3 236 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 HNRNPLLQ8WVV9 542 aaKnown RBP18.29■□□□□ 0.52
VIM-204ENST00000478746 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 PCIF1Q9H4Z3 704 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 CYP8B1Q9UNU6 501 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 APOBEC2Q9Y235 224 aaKnown RBP18.29■□□□□ 0.52
VIM-204ENST00000478746 PCDHB13Q9Y5F0 798 aa18.29■□□□□ 0.52
VIM-204ENST00000478746 ACACAQ13085 2346 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 NDUFS2O75306 463 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 GJB3O75712 270 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 GCNT3O95395 438 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 WARSP23381 471 aaKnown RBP18.28■□□□□ 0.52
VIM-204ENST00000478746 GNL1P36915 607 aaPredicted RBP18.28■□□□□ 0.52
VIM-204ENST00000478746 GRIN1Q05586 938 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 IFRD2Q12894 506 aaPredicted RBP18.28■□□□□ 0.52
VIM-204ENST00000478746 ANO4Q32M45 955 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 MDH1BQ5I0G3 518 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 SYCP2LQ5T4T6 812 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 SDE2Q6IQ49 451 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 NAXDQ8IW45 347 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 ZNF419Q96HQ0 510 aaPredicted RBP18.28■□□□□ 0.52
VIM-204ENST00000478746 INTS13Q9NVM9 706 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 SUSD2Q9UGT4 822 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 SH3BP1Q9Y3L3 701 aa18.28■□□□□ 0.52
VIM-204ENST00000478746 PLXNB3Q9ULL4 1909 aa18.27■□□□□ 0.52
VIM-204ENST00000478746 A0A1W2PQF6 199 aa18.27■□□□□ 0.52
VIM-204ENST00000478746 HOXC11O43248 304 aaPredicted RBP18.27■□□□□ 0.52
VIM-204ENST00000478746 TNNC2P02585 160 aa18.27■□□□□ 0.52
VIM-204ENST00000478746 GNSP15586 552 aa18.27■□□□□ 0.52
VIM-204ENST00000478746 GAP43P17677 238 aa18.27■□□□□ 0.52
VIM-204ENST00000478746 YWHAQP27348 245 aa18.27■□□□□ 0.52
VIM-204ENST00000478746 TMEM25Q86YD3 366 aa18.27■□□□□ 0.52
VIM-204ENST00000478746 TERB1Q8NA31 727 aa18.27■□□□□ 0.52
VIM-204ENST00000478746 MDM1Q8TC05 714 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms