RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZNF626Q68DY1 528 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 ERAP2Q6P179 960 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF783Q6ZMS7 281 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 SEMA6DQ8NFY4 1073 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 MAML1Q92585 1016 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 DDX17Q92841 729 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 TRIM43Q96BQ3 446 aaPredicted RBP4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 CNPPD1Q9BV87 410 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 TRMT13Q9NUP7 481 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 ETAA1Q9NY74 926 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 COL20A1Q9P218 1284 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 SPATA31A3Q5VYP0 1347 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 TNIKQ9UKE5 1360 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 ABCC10Q5T3U5 1492 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 KDM5BQ9UGL1 1544 aa4.87□□□□□ -1.63
CDC42BPA-212ENST00000478573 KDM6BO15054 1643 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 LRRIQ1Q96JM4 1722 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 A0A1W2PPC4 97 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 POM121BA6NF01 834 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 TARM1B6A8C7 271 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 F8W8V4 182 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 SMIM22K7EJ46 135 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 BTN3A1O00481 513 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 TCEA3O75764 348 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 DNAJB5O75953 348 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 FGF18O76093 207 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 CHEK2O96017 543 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 EPHB2P29323 1055 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 CD6P30203 668 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 HTRA4P83105 476 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 TFF2Q03403 129 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 STK3Q13188 491 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 BMPR2Q13873 1038 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 FAM209BQ5JX69 171 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 C1orf228Q6PIY5 440 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 MICU3Q86XE3 530 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 BRIP1Q9BX63 1249 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 AMBRA1Q9C0C7 1298 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF518BQ9C0D4 1074 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 WDR12Q9GZL7 423 aaKnown RBP4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 PTPRHQ9HD43 1115 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 ARFGAP3Q9NP61 516 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 NRIP3Q9NQ35 241 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 SERGEFQ9UGK8 458 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 PLEKHM1Q9Y4G2 1056 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF804BA4D1E1 1349 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 CFAP74Q9C0B2 1584 aa4.86□□□□□ -1.63
CDC42BPA-212ENST00000478573 A0A087WWL8 130 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 PROB1E7EW31 1015 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 TP73O15350 636 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 NCK2O43639 380 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 KIF20AO95235 890 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 GNAI2P04899 355 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 PARP1P09874 1014 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 KELP23276 732 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 MPGP29372 298 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 KCNJ5P48544 419 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 CHAF1AQ13111 956 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 SLC13A2Q13183 592 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 KLF9Q13886 244 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 ETFDHQ16134 617 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 SLC44A4Q53GD3 710 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 ZNF551Q7Z340 670 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 FANCBQ8NB91 859 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 FAM136AQ96C01 138 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 OSBPL9Q96SU4 736 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 SIK2Q9H0K1 926 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 CERS4Q9HA82 394 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 SERHLQ9NQF3 203 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 ARHGEF3Q9NR81 526 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 RAD54BQ9Y620 910 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 HECW1Q76N89 1606 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 ABCA9Q8IUA7 1624 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 CACNA1IQ9P0X4 2223 aa4.85□□□□□ -1.63
CDC42BPA-212ENST00000478573 MYO5CQ9NQX4 1742 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 PLB1Q6P1J6 1458 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 UACAQ9BZF9 1416 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 MBD3L4A6NDZ8 208 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 MBD3L3A6NE82 208 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 TBC1D4O60343 1298 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 NXPH3O95157 252 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 PDHA1P08559 390 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 CYP2D6P10635 497 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 PPM1AP35813 382 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 IL6STP40189 918 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 RPS16P62249 146 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 RAB32Q13637 225 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 C3orf38Q5JPI3 329 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 VPS53Q5VIR6 699 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 LMBRD2Q68DH5 695 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 HIBCHQ6NVY1 386 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 CEP85Q6P2H3 762 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 SLC29A4Q7RTT9 530 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 PPP1R32Q7Z5V6 425 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 YTHDF3Q7Z739 585 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 Q8N9P0 234 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 ATP11CQ8NB49 1132 aa4.84□□□□□ -1.63
CDC42BPA-212ENST00000478573 ATRIPQ8WXE1 791 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms