RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 TMEM45AQ9NWC5 275 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 SIDT1Q9NXL6 827 aaKnown RBP2.02□□□□□ -2.09
CALD1-218ENST00000478075 ASIC5Q9NY37 505 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 CALCOCO1Q9P1Z2 691 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 PCDHA12Q9UN75 941 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 LOC102724159A0A0B4J2E5 919 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 ZNF785A8K8V0 405 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 EXTL3O43909 919 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 CHRM3P20309 590 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 PPIFP30405 207 aaKnown RBP2.01□□□□□ -2.09
CALD1-218ENST00000478075 CYP2C19P33261 490 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 ZNF280AP59817 542 aaPredicted RBP2.01□□□□□ -2.09
CALD1-218ENST00000478075 SRSF2Q01130 221 aaKnown RBP2.01□□□□□ -2.09
CALD1-218ENST00000478075 PMP22Q01453 160 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 PWP2Q15269 919 aaKnown RBP2.01□□□□□ -2.09
CALD1-218ENST00000478075 C9orf57Q5W0N0 161 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 TMEM108Q6UXF1 575 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 RANBP10Q6VN20 620 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 PPP1R32Q7Z5V6 425 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 RNF180Q86T96 592 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 BCAS4Q8TDM0 211 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 ATG4AQ8WYN0 398 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 LPAR1Q92633 364 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 GLG1Q92896 1179 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 R3HDM4Q96D70 268 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 BRD9Q9H8M2 597 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 CFAP97Q9P2B7 532 aa2.01□□□□□ -2.09
CALD1-218ENST00000478075 PLSCR5A0PG75 271 aa2□□□□□ -2.09
CALD1-218ENST00000478075 ERC2O15083 957 aa2□□□□□ -2.09
CALD1-218ENST00000478075 KCNQ3O43525 872 aa2□□□□□ -2.09
CALD1-218ENST00000478075 BUB3O43684 328 aa2□□□□□ -2.09
CALD1-218ENST00000478075 ZEB2O60315 1214 aa2□□□□□ -2.09
CALD1-218ENST00000478075 APOHP02749 345 aaPredicted RBP2□□□□□ -2.09
CALD1-218ENST00000478075 F7P08709 466 aaPredicted RBP2□□□□□ -2.09
CALD1-218ENST00000478075 TACR3P29371 465 aa2□□□□□ -2.09
CALD1-218ENST00000478075 RFX2P48378 723 aa2□□□□□ -2.09
CALD1-218ENST00000478075 ZNF135P52742 658 aaPredicted RBP2□□□□□ -2.09
CALD1-218ENST00000478075 SP2Q02086 613 aa2□□□□□ -2.09
CALD1-218ENST00000478075 TLE1Q04724 770 aa2□□□□□ -2.09
CALD1-218ENST00000478075 LARS2Q15031 903 aaKnown RBP2□□□□□ -2.09
CALD1-218ENST00000478075 CCDC93Q567U6 631 aa2□□□□□ -2.09
CALD1-218ENST00000478075 EGFLAMQ63HQ2 1017 aa2□□□□□ -2.09
CALD1-218ENST00000478075 DENND2CQ68D51 928 aa2□□□□□ -2.09
CALD1-218ENST00000478075 MIGA2Q7L4E1 593 aa2□□□□□ -2.09
CALD1-218ENST00000478075 C16orf82Q7Z2V1 217 aa2□□□□□ -2.09
CALD1-218ENST00000478075 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2□□□□□ -2.09
CALD1-218ENST00000478075 LMNTD1Q8N9Z9 388 aa2□□□□□ -2.09
CALD1-218ENST00000478075 NRG4Q8WWG1 115 aa2□□□□□ -2.09
CALD1-218ENST00000478075 IGFBPL1Q8WX77 278 aa2□□□□□ -2.09
CALD1-218ENST00000478075 SOCS4Q8WXH5 440 aa2□□□□□ -2.09
CALD1-218ENST00000478075 DPF2Q92785 391 aa2□□□□□ -2.09
CALD1-218ENST00000478075 USP7Q93009 1102 aa2□□□□□ -2.09
CALD1-218ENST00000478075 MRGPRX4Q96LA9 322 aa2□□□□□ -2.09
CALD1-218ENST00000478075 ABHD16BQ9H3Z7 469 aa2□□□□□ -2.09
CALD1-218ENST00000478075 SERTAD3Q9UJW9 196 aa2□□□□□ -2.09
CALD1-218ENST00000478075 ANAPC4Q9UJX5 808 aa2□□□□□ -2.09
CALD1-218ENST00000478075 SSX2IPQ9Y2D8 614 aa2□□□□□ -2.09
CALD1-218ENST00000478075 CD2APQ9Y5K6 639 aa2□□□□□ -2.09
CALD1-218ENST00000478075 VPS4BO75351 444 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 KIF20AO95235 890 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 GJB1P08034 283 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 GNAI3P08754 354 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 FPR3P25089 353 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 ATP12AP54707 1039 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 PSMC1P62191 440 aaKnown RBP1.99□□□□□ -2.09
CALD1-218ENST00000478075 GNAI1P63096 354 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 DHCR24Q15392 516 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 XKR6Q5GH73 641 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 GADL1Q6ZQY3 521 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 CMIPQ8IY22 773 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 NIM1KQ8IY84 436 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.99□□□□□ -2.09
CALD1-218ENST00000478075 DPCDQ9BVM2 203 aaPredicted RBP1.99□□□□□ -2.09
CALD1-218ENST00000478075 IFT22Q9H7X7 185 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 KANSL2Q9H9L4 492 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 GNL3LQ9NVN8 582 aaKnown RBP1.99□□□□□ -2.09
CALD1-218ENST00000478075 DNAJC28Q9NX36 388 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 DNAJB11Q9UBS4 358 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 INTUQ9ULD6 942 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 COG5Q9UP83 839 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 WDR81Q562E7 1941 aa1.99□□□□□ -2.09
CALD1-218ENST00000478075 RPS10-NUDT3A0A1W2PQS6 291 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 ZNF814B7Z6K7 855 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 F8W810 466 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 EDIL3O43854 480 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 RARBP10826 455 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 GPR3P46089 330 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 LOXL3P58215 753 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 EEF1A2Q05639 463 aaKnown RBP1.98□□□□□ -2.09
CALD1-218ENST00000478075 CRYZQ08257 329 aaKnown RBP1.98□□□□□ -2.09
CALD1-218ENST00000478075 NFE2L2Q16236 605 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 C14orf177Q52M58 125 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 FAM57BQ71RH2 274 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 RAB24Q969Q5 203 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 PTDSS2Q9BVG9 487 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 C1QTNF4Q9BXJ3 329 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 MAN1C1Q9NR34 630 aa1.98□□□□□ -2.09
CALD1-218ENST00000478075 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.98□□□□□ -2.09
CALD1-218ENST00000478075 SAP30BPQ9UHR5 308 aaKnown RBP1.98□□□□□ -2.09
CALD1-218ENST00000478075 AMFRQ9UKV5 643 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms