RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 PIGRP01833 764 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 KCNA2P16389 499 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ADSSP30520 456 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 HPDP32754 393 aaPredicted RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 FLT3P36888 993 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 COILP38432 576 aaPredicted RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SLC1A1P43005 524 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 RPL21P46778 160 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 MARCKSL1P49006 195 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 LIG4P49917 911 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PMS2P54278 862 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PLTPP55058 493 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 BACE1P56817 501 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 GUCY1A3Q02108 690 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PRKCQQ04759 706 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ADCY2Q08462 1091 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PTP4A2Q12974 167 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 DRP2Q13474 957 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 BYSLQ13895 437 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 BAATQ14032 418 aaPredicted RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PSMD6Q15008 389 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ODF2Q5BJF6 829 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 XKR3Q5GH77 459 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SLFN12LQ6IEE8 588 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SNRNP48Q6IEG0 339 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 MIS18BP1Q6P0N0 1132 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SLC39A4Q6P5W5 647 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CCDC137Q6PK04 289 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ZDHHC24Q6UX98 284 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SEZ6L2Q6UXD5 910 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 DPH6Q7L8W6 267 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 YTHDF3Q7Z739 585 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SLC47A2Q86VL8 602 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ZSWIM9Q86XI8 627 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 LRRC56Q8IYG6 542 aaPredicted RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SCYL3Q8IZE3 742 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 FAM181AQ8N9Y4 354 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SLC43A3Q8NBI5 491 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ZSWIM2Q8NEG5 633 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 REPS2Q8NFH8 660 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 OR2W6PQ8NHA6 318 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 MAFAQ8NHW3 353 aaPredicted RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 MYCBPAPQ8TBZ2 947 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 TAS1R2Q8TE23 839 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 EPS8L3Q8TE67 593 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 NSUN6Q8TEA1 469 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 GRK7Q8WTQ7 553 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 DDX1Q92499 740 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 KRT35Q92764 455 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SLCO2A1Q92959 643 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CCDC74AQ96AQ1 378 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CCDC127Q96BQ5 260 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CENPTQ96BT3 561 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 TLCD1Q96CP7 247 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SAAL1Q96ER3 474 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 BICD1Q96G01 975 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PGM2Q96G03 612 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CCT8L2Q96SF2 557 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CEP89Q96ST8 783 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PPP1R16BQ96T49 567 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 TRIM31Q9BZY9 425 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 BHLHE41Q9C0J9 482 aaPredicted RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 POLR3FQ9H1D9 316 aaPredicted RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CHRDQ9H2X0 955 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PABPC3Q9H361 631 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CENPHQ9H3R5 247 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 C12orf49Q9H741 205 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 LRRC19Q9H756 370 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PDLIM7Q9NR12 457 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CYP26B1Q9NR63 512 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 PICK1Q9NRD5 415 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 C1orf112Q9NSG2 853 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 GRHL1Q9NZI5 618 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 BCCIPQ9P287 314 aaKnown RBP eCLIP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ARHGAP28Q9P2N2 729 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SLC9A2Q9UBY0 812 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 CNOT8Q9UFF9 292 aaKnown RBP5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF112Q9UJU3 913 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 ATP8A1Q9Y2Q0 1164 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 SNX24Q9Y343 169 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 NR2E1Q9Y466 385 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 OTOFQ9HC10 1997 aa5.24□□□□□ -1.57
SF3B6-202ENST00000478050 C5orf60A6NFR6 353 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 E7EVH7 732 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 EREGO14944 169 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 MEFVO15553 781 aaPredicted RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 PSTPIP1O43586 416 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ECEL1O95672 775 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 AGTP01019 485 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 HLA-DRAP01903 254 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 C4BPAP04003 597 aaKnown RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 SUPT20HL2P0C7V6 817 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 DLATP10515 647 aaKnown RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 PYGMP11217 842 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 UNGP13051 313 aaPredicted RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 RARGP13631 454 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 KRT5P13647 590 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 TBXAS1P24557 533 aaPredicted RBP5.23□□□□□ -1.57
SF3B6-202ENST00000478050 MAPK4P31152 587 aa5.23□□□□□ -1.57
SF3B6-202ENST00000478050 ICAM3P32942 547 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms