RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 DYRK1AQ13627 763 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 CD300EQ496F6 205 aaPredicted RBP5.72□□□□□ -1.49
VPS50-214ENST00000477935 CRB2Q5IJ48 1285 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 C1orf141Q5JVX7 400 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 LNX2Q8N448 690 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 BRIX1Q8TDN6 353 aaKnown RBP5.72□□□□□ -1.49
VPS50-214ENST00000477935 TAAR9Q96RI9 348 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 TEX13AQ9BXU3 409 aaPredicted RBP5.72□□□□□ -1.49
VPS50-214ENST00000477935 ANLNQ9NQW6 1124 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 INTS13Q9NVM9 706 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 MRPS18AQ9NVS2 196 aaKnown RBP5.72□□□□□ -1.49
VPS50-214ENST00000477935 AGAP1Q9UPQ3 857 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 ZBTB1Q9Y2K1 713 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 RGPD2P0DJD1 1756 aa5.72□□□□□ -1.49
VPS50-214ENST00000477935 BRCA2P51587 3418 aa5.71□□□□□ -1.49
VPS50-214ENST00000477935 ROCK2O75116 1388 aaKnown RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 ESRRBO95718 433 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 GNAI2P04899 355 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 EN2P19622 333 aaPredicted RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 GATA3P23771 443 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 MPLP40238 635 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 ANXA11P50995 505 aaKnown RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 FKBP1BP68106 108 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 MPP3Q13368 585 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 TNIP1Q15025 636 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 PPP2R5AQ15172 486 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 LRRC41Q15345 812 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 PREPLQ4J6C6 727 aaPredicted RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 CLEC4GQ6UXB4 293 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 SLC30A10Q6XR72 485 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 Q6ZNX1 250 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 DENND1CQ8IV53 801 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 ADGRG5Q8IZF4 528 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 PLBD2Q8NHP8 589 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 KLHDC4Q8TBB5 520 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 POC1BQ8TC44 478 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 ACO2Q99798 780 aaKnown RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 AIFM2Q9BRQ8 373 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 TINAGL1Q9GZM7 467 aaPredicted RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 SIK2Q9H0K1 926 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 TMX4Q9H1E5 349 aaPredicted RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 KCTD5Q9NXV2 234 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 ETAA1Q9NY74 926 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 GABBR1Q9UBS5 961 aa5.71□□□□□ -1.5
VPS50-214ENST00000477935 NOB1Q9ULX3 412 aaKnown RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 AFDNP55196 1824 aaKnown RBP5.71□□□□□ -1.5
VPS50-214ENST00000477935 E7ENX8 843 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 H3BML4 177 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 PPM1GO15355 546 aaPredicted RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 UBXN7O94888 489 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 TYRP1P17643 537 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 IL6STP40189 918 aaPredicted RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 RAB1AP62820 205 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 TAP2Q03519 686 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 EXOSC9Q06265 439 aaKnown RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 SF3B3Q15393 1217 aaKnown RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 FAM102BQ5T8I3 360 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 CXorf57Q6NSI4 855 aaKnown RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 ZNF530Q6P9A1 599 aaPredicted RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 MICALCLQ6ZW33 695 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 USP37Q86T82 979 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 NBPF5PQ86XG9 351 aaPredicted RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 CHPFQ8IZ52 775 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 SNX19Q92543 992 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 DCPSQ96C86 337 aaKnown RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 MTFMTQ96DP5 389 aaKnown RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 CNPPD1Q9BV87 410 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 ARMT1Q9H993 441 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 C11orf21Q9P2W6 132 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 G3BP2Q9UN86 482 aaKnown RBP5.7□□□□□ -1.5
VPS50-214ENST00000477935 DMTF1Q9Y222 760 aa5.7□□□□□ -1.5
VPS50-214ENST00000477935 SLX4Q8IY92 1834 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 RAB3GAP2Q9H2M9 1393 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 COL11A2P13942 1736 aaPredicted RBP5.69□□□□□ -1.5
VPS50-214ENST00000477935 A0A088AWK7 358 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 M0QYG6 137 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 PRPF3O43395 683 aaKnown RBP5.69□□□□□ -1.5
VPS50-214ENST00000477935 KIF20AO95235 890 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 LMNAP02545 664 aaKnown RBP5.69□□□□□ -1.5
VPS50-214ENST00000477935 HDCP19113 662 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 HTR1BP28222 390 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 ADRA1BP35368 520 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 GMPSP49915 693 aaPredicted RBP5.69□□□□□ -1.5
VPS50-214ENST00000477935 INHBEP58166 350 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 CXCL9Q07325 125 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 SREBF2Q12772 1141 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 TCF15Q12870 199 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 HLXQ14774 488 aaPredicted RBP5.69□□□□□ -1.5
VPS50-214ENST00000477935 KHDC1LQ5JSQ8 128 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 EMC10Q5UCC4 262 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 OLFML1Q6UWY5 402 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 OLFM4Q6UX06 510 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 PPP1R32Q7Z5V6 425 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 CELF5Q8N6W0 485 aaKnown RBP5.69□□□□□ -1.5
VPS50-214ENST00000477935 ZBTB34Q8NCN2 500 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 SLC30A5Q8TAD4 765 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 PPP1R35Q8TAP8 253 aa5.69□□□□□ -1.5
VPS50-214ENST00000477935 LRFN3Q9BTN0 628 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms