RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TEX44Q53QW1 395 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 C12orf60Q5U649 245 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 GPR141Q7Z602 305 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 ANKMY2Q8IV38 441 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 DEFB107AQ8IZN7 70 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 GSDMBQ8TAX9 411 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 HSPH1Q92598 858 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 C12orf43Q96C57 262 aaKnown RBP14.36□□□□□ -0.11
HDAC1-206ENST00000476391 NSUN4Q96CB9 384 aaKnown RBP14.36□□□□□ -0.11
HDAC1-206ENST00000476391 CTRCQ99895 268 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 FAM118BQ9BPY3 351 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 VTA1Q9NP79 307 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 MAN1C1Q9NR34 630 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 SLAIN2Q9P270 581 aa14.36□□□□□ -0.11
HDAC1-206ENST00000476391 H3BNH8 94 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 PSMD12O00232 456 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 AQP9O43315 295 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 PSTPIP1O43586 416 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 LIASO43766 372 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 MGEA5O60502 916 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 FAM155BO75949 473 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 PCYT1AP49585 367 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 CDKL1Q00532 357 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 ATP1A4Q13733 1029 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 PDK1Q15118 436 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 MOGQ16653 247 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 OGFOD2Q6N063 350 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 LMOD2Q6P5Q4 547 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 POTEGQ6S5H5 508 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 PCGF5Q86SE9 256 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 GLIS1Q8NBF1 620 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 TBC1D15Q8TC07 691 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 SERAC1Q96JX3 654 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 TRIM56Q9BRZ2 755 aaKnown RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 TDRD1Q9BXT4 1180 aaKnown RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 NYXQ9GZU5 481 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 RIOX1Q9H6W3 641 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 VAT1LQ9HCJ6 419 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 BCAP29Q9UHQ4 241 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 MYRFQ9Y2G1 1151 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 ARFGEF1Q9Y6D6 1849 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 COPEO14579 308 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 SNNO75324 88 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 GAP43P17677 238 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 ITGAXP20702 1163 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 STAT2P52630 851 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 YWHAGP61981 247 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 BFSP1Q12934 665 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 PDE1CQ14123 709 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 ZBED5Q49AG3 693 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 EGFLAMQ63HQ2 1017 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 FAM71AQ8IYT1 594 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 ZNF444Q8N0Y2 327 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 CCDC138Q96M89 665 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 GCOM2Q9BZD3 368 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 MRPL46Q9H2W6 279 aaKnown RBP14.35□□□□□ -0.11
HDAC1-206ENST00000476391 CYP4F11Q9HBI6 524 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 DMAC2Q9NW81 257 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 EPS15L1Q9UBC2 864 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 EBF1Q9UH73 591 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 CARD8Q9Y2G2 431 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 TAF1LQ8IZX4 1826 aa14.35□□□□□ -0.11
HDAC1-206ENST00000476391 A0A0B4J269 797 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 XPO1O14980 1071 aaKnown RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 DGKIO75912 1065 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 KITP10721 976 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 CCDC130P13994 396 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 PTK7Q13308 1070 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 TUBB3Q13509 450 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 ACAD10Q6JQN1 1059 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 DENND5BQ6ZUT9 1274 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 CLVS1Q8IUQ0 354 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 ARHGEF19Q8IW93 802 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 WDR75Q8IWA0 830 aaKnown RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 KATNAL2Q8IYT4 538 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 PTCD2Q8WV60 388 aaKnown RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 TRUB1Q8WWH5 349 aaKnown RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 EBF4Q9BQW3 602 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 STK39Q9UEW8 545 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 ERGIC3Q9Y282 383 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 DRG1Q9Y295 367 aaKnown RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 IKBKGQ9Y6K9 419 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UGT1A9O60656 530 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 ZSCAN5DPP0CG00 497 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 MYL4P12829 197 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UGT1A6P19224 532 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UGT1A1P22309 533 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UGT1A4P22310 534 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UGT1A3P35503 534 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UGT1A5P35504 534 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 NDST2P52849 883 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 ZYXQ15942 572 aaKnown RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 SLC15A2Q16348 729 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 CATSPER3Q86XQ3 398 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 ZNF420Q8TAQ5 688 aaPredicted RBP14.34□□□□□ -0.11
HDAC1-206ENST00000476391 JDP2Q8WYK2 163 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 CLIP3Q96DZ5 547 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 DCUN1D5Q9BTE7 237 aa14.34□□□□□ -0.11
HDAC1-206ENST00000476391 UGT1A7Q9HAW7 530 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms