RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 ATP13A4Q4VNC1 1196 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 INTS6LQ5JSJ4 861 aaKnown RBP10.7□□□□□ -0.7
PCCB-213ENST00000475214 KIAA0319Q5VV43 1072 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 CCDC137Q6PK04 289 aaKnown RBP10.7□□□□□ -0.7
PCCB-213ENST00000475214 SPOCD1Q6ZMY3 1216 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 CLEC20AQ6ZU45 233 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 PAQR9Q6ZVX9 377 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 NPAS4Q8IUM7 802 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 CCDC105Q8IYK2 499 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 SIX6OS1Q8N1H7 587 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 GRK7Q8WTQ7 553 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 IFT81Q8WYA0 676 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 SMARCD1Q96GM5 515 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 PCED1BQ96HM7 432 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 SCLYQ96I15 445 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 SLITRK1Q96PX8 696 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 CDX2Q99626 313 aaPredicted RBP10.7□□□□□ -0.7
PCCB-213ENST00000475214 HINFPQ9BQA5 517 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 COLEC11Q9BWP8 271 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 HEMGNQ9BXL5 484 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 MRPL9Q9BYD2 267 aaKnown RBP10.7□□□□□ -0.7
PCCB-213ENST00000475214 PPP1R12CQ9BZL4 782 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 UBXN6Q9BZV1 441 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 ACBD3Q9H3P7 528 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 FAM114A2Q9NRY5 505 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 PCSK1NQ9UHG2 260 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 USP18Q9UMW8 372 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 TANC1Q9C0D5 1861 aa10.7□□□□□ -0.7
PCCB-213ENST00000475214 TCRBV7S2A1N4TA0A589 114 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 PI4K2BG5E9Z4 385 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 PRPSAP2O60256 369 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 HSF2BPO75031 334 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 ALDH2P05091 517 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 ITGB1P05556 798 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 RFC2P35250 354 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 FLT3P36888 993 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 PTPN9P43378 593 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 MRPS5P82675 430 aaKnown RBP10.69□□□□□ -0.7
PCCB-213ENST00000475214 ADIGQ0VDE8 80 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 LLGL1Q15334 1064 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 CCNG2Q16589 344 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 CDO1Q16878 200 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 BOLA3Q53S33 107 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 TFDP3Q5H9I0 405 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 FAM171BQ6P995 826 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 EMBQ6PCB8 327 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 MFSD7Q6UXD7 560 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 C4orf50Q6ZRC1 276 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 SYDE1Q6ZW31 735 aaPredicted RBP10.69□□□□□ -0.7
PCCB-213ENST00000475214 DEFB128Q7Z7B8 93 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 JAMLQ86YT9 394 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 ZDHHC14Q8IZN3 488 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 ARFGAP1Q8N6T3 406 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 KCTD6Q8NC69 237 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 AENQ8WTP8 325 aaKnown RBP10.69□□□□□ -0.7
PCCB-213ENST00000475214 C1orf54Q8WWF1 131 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 CASKIN2Q8WXE0 1202 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 KHSRPQ92945 711 aaKnown RBP eCLIP10.69□□□□□ -0.73e-9■■■□□ 16.1
PCCB-213ENST00000475214 MYLPFQ96A32 169 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 PIWIL1Q96J94 861 aaKnown RBP10.69□□□□□ -0.7
PCCB-213ENST00000475214 CFAP57Q96MR6 1250 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 CASD1Q96PB1 797 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 RTP3Q9BQQ7 232 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 PLEKHA4Q9H4M7 779 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 NRDE2Q9H7Z3 1164 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 NGRNQ9NPE2 291 aaKnown RBP10.69□□□□□ -0.7
PCCB-213ENST00000475214 IL23AQ9NPF7 189 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 KLHL11Q9NVR0 708 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.69□□□□□ -0.7
PCCB-213ENST00000475214 EFR3BQ9Y2G0 817 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 TSC2P49815 1807 aa10.69□□□□□ -0.7
PCCB-213ENST00000475214 LAMA2P24043 3122 aaKnown RBP10.69□□□□□ -0.7
PCCB-213ENST00000475214 hCG_1818297A0A087WSY0 165 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 ESYT3A0FGR9 886 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 ZSCAN5CA6NGD5 496 aaPredicted RBP10.68□□□□□ -0.7
PCCB-213ENST00000475214 BHMG1C9JSJ3 638 aaPredicted RBP10.68□□□□□ -0.7
PCCB-213ENST00000475214 NRP1O14786 923 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 SYN3O14994 580 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 DAB1O75553 588 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 BEST1O76090 585 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 ECEL1O95672 775 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 FGBP02675 491 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 MYBL2P10244 700 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 KDELR1P24390 212 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 IL1R2P27930 398 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 GBP1P32455 592 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 CYP2C18P33260 490 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 CDKN2BP42772 138 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 PTGIRP43119 386 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 CARSP49589 748 aaKnown RBP10.68□□□□□ -0.7
PCCB-213ENST00000475214 TKTL1P51854 596 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 ATP11AP98196 1134 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 LMNB2Q03252 620 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 KLF1Q13351 362 aaPredicted RBP10.68□□□□□ -0.7
PCCB-213ENST00000475214 NNTQ13423 1086 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 IKBKEQ14164 716 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 HLTFQ14527 1009 aaKnown RBP eCLIP10.68□□□□□ -0.7
PCCB-213ENST00000475214 CASP8Q14790 479 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 TAF5Q15542 800 aa10.68□□□□□ -0.7
PCCB-213ENST00000475214 CCDC142Q17RM4 750 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms