RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 SERPINA13PQ6UXR4 307 aa4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 DPY19L3Q6ZPD9 716 aa4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 KRT73Q86Y46 540 aa4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 TERB1Q8NA31 727 aa4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 IL31RAQ8NI17 732 aa4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 BRIX1Q8TDN6 353 aaKnown RBP4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 DDX17Q92841 729 aaKnown RBP4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 APOL5Q9BWW9 433 aa4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 CPA4Q9UI42 421 aa4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 NDRG4Q9ULP0 352 aaKnown RBP4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 SCAF8Q9UPN6 1271 aaKnown RBP4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 SH2B3Q9UQQ2 575 aa4.4□□□□□ -1.71
TMEM50B-208ENST00000474272 A0A1W2PPL8 197 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 FRS3O43559 492 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 ATXN1LP0C7T5 689 aaKnown RBP4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 CBSLP0DN79 551 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 KITP10721 976 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 ADORA2AP29274 412 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 CBSP35520 551 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 SOX8P57073 446 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 LOXL3P58215 753 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 RHBDL3P58872 404 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 POLD3Q15054 466 aaPredicted RBP4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 LY6KQ17RY6 165 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 KHDC1LQ5JSQ8 128 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 EMC10Q5UCC4 262 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 ZNF280BQ86YH2 543 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 ZDHHC17Q8IUH5 632 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 KRT78Q8N1N4 520 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 ABHD11Q8NFV4 315 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 RP9Q8TA86 221 aaKnown RBP4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 TMEM79Q9BSE2 394 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 CIPCQ9C0C6 399 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 USP19O94966 1318 aa4.39□□□□□ -1.71
TMEM50B-208ENST00000474272 NISCHQ9Y2I1 1504 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 POC1B-GALNT4F8VUJ3 575 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 AP4M1O00189 453 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 SOCS2O14508 198 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 TBX3O15119 743 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 PQBP1O60828 265 aaKnown RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 MYL3P08590 195 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 NBPF7P0C2Y1 421 aaPredicted RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 MYF5P13349 255 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 HOXD9P28356 352 aaPredicted RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 PPIFP30405 207 aaKnown RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 RENBPP51606 427 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 TPTEP56180 551 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 PICALMQ13492 652 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 E2F2Q14209 437 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 TRIM71Q2Q1W2 868 aaKnown RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 GALNT4Q8N4A0 578 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 P2RX7Q99572 595 aaKnown RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 THAP7Q9BT49 309 aaPredicted RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 EFHD1Q9BUP0 239 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 NAA15Q9BXJ9 866 aaKnown RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 ZNF700Q9H0M5 742 aa4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 SARS2Q9NP81 518 aaKnown RBP4.38□□□□□ -1.71
TMEM50B-208ENST00000474272 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 TCRBV5S1A1TA0A578 114 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 MYMKA6NI61 221 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 H7C1Q1 480 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 MGEA5O60502 916 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 PEX14O75381 377 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 GRPP07492 148 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 CYP19A1P11511 503 aaPredicted RBP4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 EN2P19622 333 aaPredicted RBP4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 SLC7A1P30825 629 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 CCKARP32238 428 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 ARFIP2P53365 341 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 TBC1D25Q3MII6 688 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 CERKLQ49MI3 558 aaPredicted RBP4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 RNASE12Q5GAN4 147 aaKnown RBP4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 PARD3BQ8TEW8 1205 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 APIPQ96GX9 242 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 ADGRE3Q9BY15 652 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 TRIM54Q9BYV2 358 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 LRRC27Q9C0I9 530 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 CNNM1Q9NRU3 951 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 PIH1D1Q9NWS0 290 aaKnown RBP4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 STK32BQ9NY57 414 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 TPCN1Q9ULQ1 816 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 PHTF1Q9UMS5 762 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 MED16Q9Y2X0 877 aa4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.37□□□□□ -1.71
TMEM50B-208ENST00000474272 FGBP02675 491 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 CSF1RP07333 972 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 PRF1P14222 555 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 PIK3CBP42338 1070 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 TM4SF4P48230 202 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 KCNJ5P48544 419 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 E2F1Q01094 437 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 HDAC1Q13547 482 aaPredicted RBP4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 ZNF268Q14587 947 aaPredicted RBP4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 RBMS2Q15434 407 aaKnown RBP4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 CYP1B1Q16678 543 aa4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 ZIK1Q3SY52 487 aaPredicted RBP4.36□□□□□ -1.71
TMEM50B-208ENST00000474272 AMOTQ4VCS5 1084 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms