RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 DDX1Q92499 740 aaKnown RBP17.28■□□□□ 0.36
CPA4-205ENST00000474254 SMARCD1Q96GM5 515 aa17.28■□□□□ 0.36
CPA4-205ENST00000474254 TSG101Q99816 390 aa17.28■□□□□ 0.36
CPA4-205ENST00000474254 NIF3L1Q9GZT8 377 aa17.28■□□□□ 0.36
CPA4-205ENST00000474254 MMRN2Q9H8L6 949 aa17.28■□□□□ 0.36
CPA4-205ENST00000474254 APOBEC3GQ9HC16 384 aaKnown RBP17.28■□□□□ 0.36
CPA4-205ENST00000474254 TRPM5Q9NZQ8 1165 aa17.28■□□□□ 0.36
CPA4-205ENST00000474254 CCDC163A0A0D9SF12 145 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 SLC16A3O15427 465 aaKnown RBP17.27■□□□□ 0.36
CPA4-205ENST00000474254 RNF40O75150 1001 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 ARSAP15289 507 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 PFKLP17858 780 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 DRD1P21728 446 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 PXNP49023 591 aaPredicted RBP17.27■□□□□ 0.36
CPA4-205ENST00000474254 MXI1P50539 228 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 PDE6CP51160 858 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 PMS1P54277 932 aaKnown RBP17.27■□□□□ 0.36
CPA4-205ENST00000474254 LRRC63Q05C16 580 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 MTF1Q14872 753 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 KRT39Q6A163 491 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 PKN3Q6P5Z2 889 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 ACOT1Q86TX2 421 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 CRYBG2Q8N1P7 616 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 ARL14EPQ8N8R7 260 aaPredicted RBP17.27■□□□□ 0.36
CPA4-205ENST00000474254 LOXL4Q96JB6 756 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 ARRDC1-AS1Q9H2J1 176 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 CYP3A43Q9HB55 503 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 DMAP1Q9NPF5 467 aaPredicted RBP17.27■□□□□ 0.36
CPA4-205ENST00000474254 KRT82Q9NSB4 513 aa17.27■□□□□ 0.36
CPA4-205ENST00000474254 TRIM49BA6NDI0 452 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 GDF9O60383 454 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 GADD45BO75293 160 aaPredicted RBP17.26■□□□□ 0.35
CPA4-205ENST00000474254 EPN2O95208 641 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 EGFP01133 1207 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 TCF3P15923 654 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 HOXC13P31276 330 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 PPP3CCP48454 512 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 IFNAR2P48551 515 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 FKBP3Q00688 224 aaKnown RBP17.26■□□□□ 0.35
CPA4-205ENST00000474254 ORC1Q13415 861 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 FBXO43Q4G163 708 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 ANKRD40Q6AI12 368 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 SLITRK1Q96PX8 696 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 CYP2S1Q96SQ9 504 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 P2RY13Q9BPV8 354 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 MED10Q9BTT4 135 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.26■□□□□ 0.35
CPA4-205ENST00000474254 DUS2Q9NX74 493 aaKnown RBP17.26■□□□□ 0.35
CPA4-205ENST00000474254 MAN1B1Q9UKM7 699 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 ARHGAP26Q9UNA1 814 aa17.26■□□□□ 0.35
CPA4-205ENST00000474254 ZNF840PA6NDX5 716 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 TNFRSF10BO14763 440 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 PSMA7O14818 248 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 STX10O60499 249 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 AP1G2O75843 785 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 RTN3O95197 1032 aaPredicted RBP17.25■□□□□ 0.35
CPA4-205ENST00000474254 OLFM2O95897 454 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 CCDC130P13994 396 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 HDCP19113 662 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 TAF10Q12962 218 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 STIM1Q13586 685 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 NUP93Q8N1F7 819 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 CAMKK1Q8N5S9 505 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 CCDC150Q8NCX0 1101 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 FBXL13Q8NEE6 735 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 SLC2A14Q8TDB8 520 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 ATP2A3Q93084 1043 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 FAXDC2Q96IV6 333 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 TWNKQ96RR1 684 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 KCNK16Q96T55 309 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 ECT2Q9H8V3 914 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 FAM49BQ9NUQ9 324 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 EML5Q05BV3 1969 aa17.25■□□□□ 0.35
CPA4-205ENST00000474254 OTOL1A6NHN0 477 aaPredicted RBP17.24■□□□□ 0.35
CPA4-205ENST00000474254 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
CPA4-205ENST00000474254 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
CPA4-205ENST00000474254 YWHAQP27348 245 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 GJA4P35212 333 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 PPP1R2P41236 205 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 GALK1P51570 392 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 SLC5A3P53794 718 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 NR1H3Q13133 447 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 SF3A2Q15428 464 aaKnown RBP17.24■□□□□ 0.35
CPA4-205ENST00000474254 CCDC6Q16204 474 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 DCAF17Q5H9S7 520 aaPredicted RBP17.24■□□□□ 0.35
CPA4-205ENST00000474254 KBTBD6Q86V97 674 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 PDZD8Q8NEN9 1154 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 ZMIZ2Q8NF64 920 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 RPLP0P6Q8NHW5 317 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 SH3RF2Q8TEC5 729 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 OSCP1Q8WVF1 389 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 OVCA2Q8WZ82 227 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 CD101Q93033 1021 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 ACDQ96AP0 544 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 CHFRQ96EP1 664 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 HHIPQ96QV1 700 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 CSNK1G1Q9HCP0 422 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 IL37Q9NZH6 218 aa17.24■□□□□ 0.35
CPA4-205ENST00000474254 CACNA1BQ00975 2339 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms