RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 KPNA5O15131 536 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 A1BGP04217 495 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 BTF3P20290 206 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 FGFR2P21802 821 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 SLC5A2P31639 672 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 PTH2RP49190 550 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 CCT8P50990 548 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 HTRA4P83105 476 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 EIF2B5Q13144 721 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 UBE4AQ14139 1066 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 NPY5RQ15761 445 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 ZIK1Q3SY52 487 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 DGKKQ5KSL6 1271 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 TREML2Q5T2D2 321 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 DEPDC1Q5TB30 811 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 IZUMO3Q5VZ72 239 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 PLAG1Q6DJT9 500 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 FCRL6Q6DN72 434 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 CEP85Q6P2H3 762 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 TSHZ1Q6ZSZ6 1077 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 SLC29A4Q7RTT9 530 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 LRRC71Q8N4P6 559 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 SAMD3Q8N6K7 520 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 VGLL2Q8N8G2 317 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 ABHD11Q8NFV4 315 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 DEPTORQ8TB45 409 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 DNAJB14Q8TBM8 379 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 ZNF384Q8TF68 577 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 GLG1Q92896 1179 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 SARAFQ96BY9 339 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 FAM227BQ96M60 508 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 HAPLN3Q96S86 360 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 TBCBQ99426 244 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 DPCDQ9BVM2 203 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 VN1R3Q9BXE9 311 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 NAA15Q9BXJ9 866 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 KRTAP1-5Q9BYS1 174 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 ZBTB26Q9HCK0 441 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 ALG13Q9NP73 1137 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 SNX15Q9NRS6 342 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 DNAJB11Q9UBS4 358 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 MRPS17Q9Y2R5 130 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 CEP83Q9Y592 693 aa3.93□□□□□ -1.78
ECHDC1-213ENST00000474240 ARHGEF17Q96PE2 2063 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 LINC00473A8K010 186 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 A8MVJ9 347 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 H7C4K7 107 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 IKBKBO14920 756 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 CCNT2O60583 730 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 FGF18O76093 207 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 EBLN1P0CF75 366 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 MYCLP12524 364 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 TNFSF4P23510 183 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 PGDP52209 483 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 PDE1AP54750 535 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 EEFSECP57772 596 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 ARL13BQ3SXY8 428 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 MAP9Q49MG5 647 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 AKNAD1Q5T1N1 836 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 ARL6IP4Q66PJ3 421 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 SUMO4Q6EEV6 95 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 MRNIPQ6NTE8 343 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 ZDHHC24Q6UX98 284 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 MAVSQ7Z434 540 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 FAM186BQ8IYM0 893 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 SIRT6Q8N6T7 355 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 RNF152Q8N8N0 203 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 C9orf106Q8NAJ2 232 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 MBD3L2Q8NHZ7 208 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 SCARB1Q8WTV0 552 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 SNX27Q96L92 541 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 FSD1LQ9BXM9 530 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 GBA2Q9HCG7 927 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 ARFGAP3Q9NP61 516 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 TM7SF3Q9NS93 570 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 TMOD4Q9NZQ9 345 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 NKX1-2Q9UD57 310 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 STEAP1Q9UHE8 339 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 CCNL1Q9UK58 526 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 CA14Q9ULX7 337 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 DRG1Q9Y295 367 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 SNX14Q9Y5W7 946 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 WNT6Q9Y6F9 365 aa3.92□□□□□ -1.78
ECHDC1-213ENST00000474240 F8W8V4 182 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 KCNQ3O43525 872 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 TMPRSS11DO60235 418 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 JTBO76095 146 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 C1RP00736 705 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 FESP07332 822 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 FAM163BP0C2L3 166 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 DRD4P21917 467 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 RBL1P28749 1068 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 PCSK6P29122 969 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 UQCRC1P31930 480 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 HTR3AP46098 478 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 GATMP50440 423 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 ALDH5A1P51649 535 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 CLCN2P51788 898 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 TIRAPP58753 221 aa3.91□□□□□ -1.78
ECHDC1-213ENST00000474240 OS9Q13438 667 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms