RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 USP46P62068 366 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC7A9P82251 487 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 TFAMQ00059 246 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 MYL7Q01449 175 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SCAPQ12770 1279 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 RESTQ13127 1097 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 DHX8Q14562 1220 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 DHCR24Q15392 516 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 DUOXA1Q1HG43 343 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 EOGTQ5NDL2 527 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 EMC10Q5UCC4 262 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SCARA3Q6AZY7 606 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SLFN12LQ6IEE8 588 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 FAM171BQ6P995 826 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 C19orf48Q6RUI8 117 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 FILIP1Q7Z7B0 1213 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 METTL3Q86U44 580 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 PDZD3Q86UT5 571 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 NT5DC4Q86YG4 428 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SPATA2LQ8IUW3 424 aaPredicted RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SCN4BQ8IWT1 228 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 ADGRF2Q8IZF7 708 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 ADGRG2Q8IZP9 1017 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 TMEM86AQ8N2M4 240 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 PHTF2Q8N3S3 785 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 HDDC3Q8N4P3 179 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 MINDY1Q8N5J2 469 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 LRRC52Q8N7C0 313 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 KIAA1958Q8N8K9 716 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 ZSWIM2Q8NEG5 633 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 OR2I1PQ8NGU4 316 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 CEP76Q8TAP6 659 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 HMGB4Q8WW32 186 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 FAM84AQ96KN4 292 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SPATA17Q96L03 361 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 PNKPQ96T60 521 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 TTLL2Q9BWV7 592 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 GTPBP2Q9BX10 602 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 KDM4CQ9H3R0 1056 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 ST6GALNAC4Q9H4F1 302 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 POLMQ9NP87 494 aaPredicted RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 ZDHHC4Q9NPG8 344 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 DNAAF2Q9NVR5 837 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 GDAP2Q9NXN4 497 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 BCCIPQ9P287 314 aaKnown RBP eCLIP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC6A14Q9UN76 642 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 AGAP1Q9UPQ3 857 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 MYO18AQ92614 2054 aaKnown RBP5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 NAV2Q8IVL1 2488 aa5.49□□□□□ -1.53
SNRNP40-204ENST00000474025 BSNQ9UPA5 3926 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ZNF840PA6NDX5 716 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 MYMKA6NI61 221 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 AP5Z1O43299 807 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ATP2C2O75185 946 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 TBCAO75347 108 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 GJB3O75712 270 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 OLFM2O95897 454 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ADH1BP00325 375 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ADH1CP00326 375 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 OAS1P00973 400 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 APODP05090 189 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 KRT18P05783 430 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ADH5P11766 374 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 PLCG1P19174 1290 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 BDNFP23560 247 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 GRIA2P42262 883 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 TNFRSF4P43489 277 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 LHX1P48742 406 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 PSMC1P62191 440 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 RPL6Q02878 288 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 KDSRQ06136 332 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 GFPT1Q06210 699 aaPredicted RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 KCNA1Q09470 495 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 BYSLQ13895 437 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 MCM6Q14566 821 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 SOWAHAQ2M3V2 549 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 COL28A1Q2UY09 1125 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 RILPL1Q5EBL4 403 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ARL6IP4Q66PJ3 421 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 RHBDF2Q6PJF5 856 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 VSTM1Q6UX27 236 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 C4orf50Q6ZRC1 276 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 DENND5BQ6ZUT9 1274 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 LIMS2Q7Z4I7 341 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 RABEPKQ7Z6M1 372 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 SLC41A1Q8IVJ1 513 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 BRSK2Q8IWQ3 736 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ETFBKMTQ8IXQ9 262 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 DEFB119Q8N690 84 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 TOP6BLQ8N6T0 577 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 LSM14AQ8ND56 463 aaKnown RBP5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 KBTBD7Q8WVZ9 684 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 ADAMTS14Q8WXS8 1223 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 POMGNT1Q8WZA1 660 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 RAD54LQ92698 747 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 MYLPFQ96A32 169 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 AK8Q96MA6 479 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 CEP295NLQ96MC4 621 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 CAMK1GQ96NX5 476 aa5.48□□□□□ -1.53
SNRNP40-204ENST00000474025 BBC3Q96PG8 261 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms