RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 SLC22A12Q96S37 553 aa20.76■□□□□ 0.91
APTX-218ENST00000473270 PKMYT1Q99640 499 aa20.76■□□□□ 0.91
APTX-218ENST00000473270 RWDD2AQ9UIY3 292 aa20.76■□□□□ 0.91
APTX-218ENST00000473270 SYCE3A1L190 88 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 ATP2C2O75185 946 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 FGFR1OPO95684 399 aaKnown RBP20.75■□□□□ 0.91
APTX-218ENST00000473270 TCF3P15923 654 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 WARSP23381 471 aaKnown RBP20.75■□□□□ 0.91
APTX-218ENST00000473270 SEC13P55735 322 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 TYRO3Q06418 890 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 ZSCAN23Q3MJ62 389 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 C2orf27AQ580R0 203 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 DAB2IPQ5VWQ8 1189 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 RDH13Q8NBN7 331 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 MYCBPAPQ8TBZ2 947 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 DMAC2Q9NW81 257 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 ATP8B3O60423 1300 aa20.75■□□□□ 0.91
APTX-218ENST00000473270 LEFTY2O00292 366 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 PHACTR2O75167 634 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 LMO2P25791 158 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 HOXC13P31276 330 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 STX17P56962 302 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 SNRNP35Q16560 246 aaKnown RBP20.74■□□□□ 0.91
APTX-218ENST00000473270 TPD52L1Q16890 204 aaPredicted RBP20.74■□□□□ 0.91
APTX-218ENST00000473270 PREPLQ4J6C6 727 aaPredicted RBP20.74■□□□□ 0.91
APTX-218ENST00000473270 MDH1BQ5I0G3 518 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 PLA2G2CQ5R387 149 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 CEP135Q66GS9 1140 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 NUDT18Q6ZVK8 323 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 CBWD2Q8IUF1 395 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 OR5B17Q8NGF7 314 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 RIN3Q8TB24 985 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 EDEM2Q9BV94 578 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 ELOVL4Q9GZR5 314 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 NAT10Q9H0A0 1025 aaKnown RBP20.74■□□□□ 0.91
APTX-218ENST00000473270 DUSP15Q9H1R2 295 aaPredicted RBP20.74■□□□□ 0.91
APTX-218ENST00000473270 LINC00597Q9H2U6 94 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 GCNT4Q9P109 453 aa20.74■□□□□ 0.91
APTX-218ENST00000473270 TRIM49BA6NDI0 452 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 MAP3K13O43283 966 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 HCRTO43612 131 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 ADH1CP00326 375 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 PSMC2P35998 433 aaKnown RBP20.73■□□□□ 0.91
APTX-218ENST00000473270 PMS1P54277 932 aaKnown RBP20.73■□□□□ 0.91
APTX-218ENST00000473270 IFRD2Q12894 506 aaPredicted RBP20.73■□□□□ 0.91
APTX-218ENST00000473270 WDR72Q3MJ13 1102 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 TRAPPC11Q7Z392 1133 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 KIAA1958Q8N8K9 716 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 CXorf38Q8TB03 319 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 KBTBD7Q8WVZ9 684 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 PCED1BQ96HM7 432 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 SPACA7Q96KW9 195 aa20.73■□□□□ 0.91
APTX-218ENST00000473270 F8VP50 259 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 KHNYNO15037 678 aaKnown RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 KRT37O76014 449 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 APODP05090 189 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 FAM163BP0C2L3 166 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 EPB41P11171 864 aaKnown RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 TRIM21P19474 475 aaKnown RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 NOP14P78316 857 aaKnown RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 BYSLQ13895 437 aaKnown RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 N4BP2L1Q5TBK1 243 aaPredicted RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 NAIF1Q69YI7 327 aaPredicted RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 ANO7Q6IWH7 933 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 TTI2Q6NXR4 508 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 CYP2U1Q7Z449 544 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 PDZD8Q8NEN9 1154 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 CCDC127Q96BQ5 260 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 FAM84AQ96KN4 292 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 C8orf48Q96LL4 319 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 CEP63Q96MT8 703 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 SMOC1Q9H4F8 434 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 POLMQ9NP87 494 aaPredicted RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 CRTAC1Q9NQ79 661 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 POLR3BQ9NW08 1133 aaPredicted RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 BCCIPQ9P287 314 aaKnown RBP eCLIP20.72■□□□□ 0.91
APTX-218ENST00000473270 TBC1D14Q9P2M4 693 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 CPQQ9Y646 472 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 DENND4CQ5VZ89 1909 aa20.72■□□□□ 0.91
APTX-218ENST00000473270 TPRP12270 2363 aaKnown RBP20.72■□□□□ 0.91
APTX-218ENST00000473270 ACACBO00763 2458 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 BCLAF3A2AJT9 711 aaKnown RBP20.71■□□□□ 0.91
APTX-218ENST00000473270 A8MXQ7 604 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.71■□□□□ 0.91
APTX-218ENST00000473270 DCLK1O15075 740 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 MAPK13O15264 365 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 ZBTB24O43167 697 aaPredicted RBP20.71■□□□□ 0.91
APTX-218ENST00000473270 TACC1O75410 805 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 RTN3O95197 1032 aaPredicted RBP20.71■□□□□ 0.91
APTX-218ENST00000473270 MBL2P11226 248 aaPredicted RBP20.71■□□□□ 0.91
APTX-218ENST00000473270 PTPN1P18031 435 aaKnown RBP20.71■□□□□ 0.91
APTX-218ENST00000473270 SLC7A9P82251 487 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 MRPS21P82921 87 aaKnown RBP20.71■□□□□ 0.91
APTX-218ENST00000473270 CCDC142Q17RM4 750 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 BTBD8Q5XKL5 378 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 FILIP1Q7Z7B0 1213 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 USP33Q8TEY7 942 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 PNKPQ96T60 521 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 CGRRF1Q99675 332 aa20.71■□□□□ 0.91
APTX-218ENST00000473270 LSM14BQ9BX40 385 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms