RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 NCANO14594 1321 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 A1L4Q6 167 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 LGALS16A8MUM7 142 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 VWC2LB2RUY7 222 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 AGPSO00116 658 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 PRRG2O14669 202 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 PEX1O43933 1283 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 CCNT2O60583 730 aaKnown RBP4.51□□□□□ -1.69
PTCD3-209ENST00000472044 NBNO60934 754 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 ERBB2P04626 1255 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 PDHA1P08559 390 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 HGFP14210 728 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 PECAM1P16284 738 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-209ENST00000472044 CHKAP35790 457 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 AVPR1BP47901 424 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 BMPR2Q13873 1038 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 ELF2Q15723 593 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 LY6KQ17RY6 165 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 ANO1Q5XXA6 986 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 SLC9A4Q6AI14 798 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 Q6YL49 198 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 MAVSQ7Z434 540 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 RAB11FIP4Q86YS3 637 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 ULK2Q8IYT8 1036 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 LCORLQ8N3X6 602 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 SPATA5Q8NB90 893 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 TOR1AIP2Q8NFQ8 470 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 SUN3Q8TAQ9 357 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 IPO4Q8TEX9 1081 aaKnown RBP4.51□□□□□ -1.69
PTCD3-209ENST00000472044 ABHD5Q8WTS1 349 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 GLG1Q92896 1179 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 ZBTB45Q96K62 511 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-209ENST00000472044 HIST1H2AAQ96QV6 131 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 WDR24Q96S15 920 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 GABRQQ9UN88 632 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 USP22Q9UPT9 525 aa4.51□□□□□ -1.69
PTCD3-209ENST00000472044 DRG1Q9Y295 367 aaKnown RBP4.51□□□□□ -1.69
PTCD3-209ENST00000472044 M0R3H8 397 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 PIP5K1BO14986 540 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 MATN3O15232 486 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 DHHO43323 396 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 PIP5K1CO60331 668 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 SNX2O60749 519 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 TJP3O95049 919 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 NXPH3O95157 252 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 ESRRBO95718 433 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 RHOP08100 348 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 IL6RP08887 468 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-209ENST00000472044 CD19P15391 556 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 NPPBP16860 134 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 HTR7P34969 479 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 LIPAP38571 399 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 MPLP40238 635 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 POLE2P56282 527 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 GPS1Q13098 491 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 TBCCQ15814 346 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 TXNRD1Q16881 649 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 ARHGAP15Q53QZ3 475 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 TANGO2Q6ICL3 276 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 CRIP3Q6Q6R5 217 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 USP51Q70EK9 711 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 ANKRD42Q8N9B4 389 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 SLC9A6Q92581 669 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 RSC1A1Q92681 617 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 FBXL20Q96IG2 436 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 NUDT22Q9BRQ3 303 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 ISCA1Q9BUE6 129 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 ZNF341Q9BYN7 854 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 DACT1Q9NYF0 836 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 RIMKLBQ9ULI2 386 aa4.5□□□□□ -1.69
PTCD3-209ENST00000472044 EPN1Q9Y6I3 576 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-209ENST00000472044 GRID2IPA4D2P6 1211 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 CCDC151A5D8V7 595 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 AQP12BA6NM10 295 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 NPIPB8E9PQR5 432 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 ACKR2O00590 384 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 CBFA2T3O75081 653 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 VIPP01282 170 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 PRKCBP05771 671 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 VEGFAP15692 232 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-209ENST00000472044 ZFXP17010 805 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-209ENST00000472044 RBL1P28749 1068 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 MCM7P33993 719 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 ADRA1BP35368 520 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 MTHFSP49914 203 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 SEC24CP53992 1094 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 MPP3Q13368 585 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 ACOX1Q15067 660 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 ZXDCQ2QGD7 858 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-209ENST00000472044 TMEM95Q3KNT9 176 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 TREML2Q5T2D2 321 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 KAZNQ674X7 775 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 IGFL4Q6B9Z1 124 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 GGT6Q6P531 493 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 CAND1Q86VP6 1230 aaKnown RBP4.49□□□□□ -1.69
PTCD3-209ENST00000472044 GATAD2AQ86YP4 633 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 RASGRP3Q8IV61 690 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 ATG16L2Q8NAA4 619 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 RP9Q8TA86 221 aaKnown RBP4.49□□□□□ -1.69
PTCD3-209ENST00000472044 STYXQ8WUJ0 223 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms