RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 DTX3Q8N9I9 347 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 LSM14AQ8ND56 463 aaKnown RBP6.67□□□□□ -1.34
NF1-208ENST00000471572 DNERQ8NFT8 737 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 MDM1Q8TC05 714 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 SH3RF3Q8TEJ3 882 aaPredicted RBP6.67□□□□□ -1.34
NF1-208ENST00000471572 GRAMD1AQ96CP6 724 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 SLC25A32Q9H2D1 315 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 GPR35Q9HC97 309 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 XPNPEP3Q9NQH7 507 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 RLIMQ9NVW2 624 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 WDR35Q9P2L0 1181 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 DNMT3BQ9UBC3 853 aaKnown RBP6.67□□□□□ -1.34
NF1-208ENST00000471572 GRIN2AQ12879 1464 aa6.67□□□□□ -1.34
NF1-208ENST00000471572 CLASP1Q7Z460 1538 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 ADAMTS12P58397 1594 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 A0A1W2PQ09 198 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 ALDH1A2O94788 518 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 GLRBP48167 497 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 MCM2P49736 904 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 DDR1Q08345 913 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 PUM1Q14671 1186 aaKnown RBP eCLIP6.66□□□□□ -1.34
NF1-208ENST00000471572 CATSPER4Q7RTX7 472 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 USP37Q86T82 979 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 NR1H4Q96RI1 486 aaPredicted RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 METTL22Q9BUU2 404 aaPredicted RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 SPATA5L1Q9BVQ7 753 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 ANKRD2Q9GZV1 360 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 TNFRSF12AQ9NP84 129 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 SAE1Q9UBE0 346 aaPredicted RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 NUDT5Q9UKK9 219 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 GTF3C4Q9UKN8 822 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 PLA2G2DQ9UNK4 145 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 HDAC5Q9UQL6 1122 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 RCE1Q9Y256 329 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 F8W031 263 aaPredicted RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 CCP110O43303 1012 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 HNRNPRO43390 633 aaKnown RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 LMNAP02545 664 aaKnown RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 FSTP19883 344 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 GCH1P30793 250 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 CIITAP33076 1130 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 PSMB10P40306 273 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 STAT5BP51692 787 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 RAD23AP54725 363 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 GPS1Q13098 491 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 DUSP8Q13202 625 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 TMEM200BQ69YZ2 307 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 SYNE3Q6ZMZ3 975 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 SEM1Q6ZVN7 128 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 ZNF365Q70YC5 407 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 ANKS4BQ8N8V4 417 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 ZBTB8BQ8NAP8 495 aaPredicted RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 ETNPPLQ8TBG4 499 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 SMCR8Q8TEV9 937 aaPredicted RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 ZFPM2Q8WW38 1151 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 RBM17Q96I25 401 aaKnown RBP6.66□□□□□ -1.34
NF1-208ENST00000471572 FNBP1Q96RU3 617 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 MESP1Q9BRJ9 268 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 SNX11Q9Y5W9 270 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 LYVE1Q9Y5Y7 322 aa6.66□□□□□ -1.34
NF1-208ENST00000471572 PNMA6EA0A0J9YXQ4 647 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 CHL1O00533 1208 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 PEX12O00623 359 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 KIAA0391O15091 583 aaKnown RBP6.65□□□□□ -1.35
NF1-208ENST00000471572 FYB1O15117 783 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 PSPNO60542 156 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 CER1O95813 267 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 GASTP01350 101 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 IL2RBP14784 551 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 MSH2P43246 934 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 RBP5P82980 135 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 AIMP1Q12904 312 aaKnown RBP6.65□□□□□ -1.35
NF1-208ENST00000471572 MED22Q15528 200 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 ZNF750Q32MQ0 723 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 TIGD5Q53EQ6 642 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 MCTP2Q6DN12 878 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 MTFR2Q6P444 385 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 ZNF280BQ86YH2 543 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 PDSS2Q86YH6 399 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 BRSK2Q8IWQ3 736 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 NUP93Q8N1F7 819 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 LILRB1Q8NHL6 650 aaPredicted RBP6.65□□□□□ -1.35
NF1-208ENST00000471572 NEDD1Q8NHV4 660 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 WDR48Q8TAF3 677 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 HMGB4Q8WW32 186 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 SYTL4Q96C24 671 aaPredicted RBP6.65□□□□□ -1.35
NF1-208ENST00000471572 ELP4Q96EB1 424 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 CEP95Q96GE4 821 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 LBHD1Q9BQE6 289 aaPredicted RBP6.65□□□□□ -1.35
NF1-208ENST00000471572 SYT3Q9BQG1 590 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 PACSIN1Q9BY11 444 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 KCNH6Q9H252 994 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 SEMA4BQ9NPR2 832 aaPredicted RBP6.65□□□□□ -1.35
NF1-208ENST00000471572 ZFP69BQ9UJL9 534 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 PBRM1Q86U86 1689 aa6.65□□□□□ -1.35
NF1-208ENST00000471572 ENTPD3O75355 529 aa6.64□□□□□ -1.35
NF1-208ENST00000471572 KIF20AO95235 890 aa6.64□□□□□ -1.35
NF1-208ENST00000471572 RAP2AP10114 183 aa6.64□□□□□ -1.35
NF1-208ENST00000471572 HNF4AP41235 474 aa6.64□□□□□ -1.35
NF1-208ENST00000471572 PDE6CP51160 858 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms