RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DDX27Q96GQ7 796 aaKnown RBP18.37■□□□□ 0.53
HSPG2-208ENST00000471322 RUNDC3BQ96NL0 473 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 MCEEQ96PE7 176 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.37■□□□□ 0.53
HSPG2-208ENST00000471322 DMGDHQ9UI17 866 aaKnown RBP18.37■□□□□ 0.53
HSPG2-208ENST00000471322 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.36■□□□□ 0.53
HSPG2-208ENST00000471322 CYB561D2O14569 222 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 RRP9O43818 475 aaKnown RBP18.36■□□□□ 0.53
HSPG2-208ENST00000471322 CXCL14O95715 111 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 HYAL1Q12794 435 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 ACAP1Q15027 740 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 PKDCCQ504Y2 493 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 PPP1R26Q5T8A7 1209 aaPredicted RBP18.36■□□□□ 0.53
HSPG2-208ENST00000471322 FUT10Q6P4F1 479 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 HDXQ7Z353 690 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 KATNAL2Q8IYT4 538 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 TMEM86AQ8N2M4 240 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 C12orf29Q8N999 325 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 EIF1ADQ8N9N8 165 aaKnown RBP18.36■□□□□ 0.53
HSPG2-208ENST00000471322 UBA3Q8TBC4 463 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.36■□□□□ 0.53
HSPG2-208ENST00000471322 ZBP1Q9H171 429 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 L1RE1Q9UN81 338 aa18.36■□□□□ 0.53
HSPG2-208ENST00000471322 PODXLO00592 558 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 FSCN2O14926 492 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 HEXIM1O94992 359 aaKnown RBP18.35■□□□□ 0.53
HSPG2-208ENST00000471322 ERBB2P04626 1255 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 SLC7A5Q01650 507 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 CEP57Q86XR8 500 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 CPNE8Q86YQ8 564 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 ZDHHC17Q8IUH5 632 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 ANKRD52Q8NB46 1076 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 EXD1Q8NHP7 514 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 CYLDQ9NQC7 956 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 GDF3Q9NR23 364 aa18.35■□□□□ 0.53
HSPG2-208ENST00000471322 GOLGA8SH3BPF8 625 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 LINC01565O15544 149 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 RAD51CO43502 376 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 CHRNA3P32297 505 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SSR1P43307 286 aaKnown RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 BRCC3P46736 316 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 LHX1P48742 406 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 RCOR2Q8IZ40 523 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 MRPL43Q8N983 215 aaKnown RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SPATA18Q8TC71 538 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SLC35F5Q8WV83 523 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 UROC1Q96N76 676 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SLC4A5Q9BY07 1137 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 TLE6Q9H808 572 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 ST7Q9NRC1 585 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 USTQ9Y2C2 406 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 C2orf71A6NGG8 1288 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 PHF2O75151 1096 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 ZMYND10O75800 440 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SEC31AO94979 1220 aaKnown RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 GJB6O95452 261 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SOD2P04179 222 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 PDGFRBP09619 1106 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 PSMA2P25787 234 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 RFC1P35251 1148 aaPredicted RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 BCAT1P54687 386 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 GUCY2DQ02846 1103 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 TFF2Q03403 129 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 DHX34Q14147 1143 aaKnown RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SMC1AQ14683 1233 aaKnown RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 FAM171A1Q5VUB5 890 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 KIAA1841Q6NSI8 718 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 DCLRE1AQ6PJP8 1040 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 CD300LGQ6UXG3 332 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 TMEM110Q86TL2 294 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SENP8Q96LD8 212 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 DDX47Q9H0S4 455 aaKnown RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 HOMER3Q9NSC5 361 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 DDX56Q9NY93 547 aaKnown RBP18.34■□□□□ 0.53
HSPG2-208ENST00000471322 NME7Q9Y5B8 376 aa18.34■□□□□ 0.53
HSPG2-208ENST00000471322 SF3B1O75533 1304 aaKnown RBP eCLIP18.33■□□□□ 0.532e-6■■■■■ 80.7
HSPG2-208ENST00000471322 CARNS1A5YM72 827 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 FAM187AA6NFU0 413 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 GABRDO14764 452 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 GLI1P08151 1106 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 CTSAP10619 480 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 SLC8A3P57103 927 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 BST2Q10589 180 aaKnown RBP18.33■□□□□ 0.52
HSPG2-208ENST00000471322 CUL1Q13616 776 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 CYP1B1Q16678 543 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 POLNQ7Z5Q5 900 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 TTC30AQ86WT1 665 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 RBM41Q96IZ5 413 aaKnown RBP18.33■□□□□ 0.52
HSPG2-208ENST00000471322 FUT8Q9BYC5 575 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 EPB41L5Q9HCM4 733 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 FAM49BQ9NUQ9 324 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 CLDND1Q9NY35 253 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 OGFRQ9NZT2 677 aa18.33■□□□□ 0.52
HSPG2-208ENST00000471322 SCN1AP35498 2009 aa18.32■□□□□ 0.52
HSPG2-208ENST00000471322 ARHGEF37A1IGU5 675 aa18.32■□□□□ 0.52
HSPG2-208ENST00000471322 F8VP50 259 aa18.32■□□□□ 0.52
HSPG2-208ENST00000471322 EFEMP2O95967 443 aa18.32■□□□□ 0.52
HSPG2-208ENST00000471322 URODP06132 367 aa18.32■□□□□ 0.52
HSPG2-208ENST00000471322 LMO2P25791 158 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms