RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TMEM199Q8N511 208 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 CCDC26Q8TAB7 109 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 TEKT4Q8WW24 435 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 IRGQQ8WZA9 623 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 CENPIQ92674 756 aaPredicted RBP9.83□□□□□ -0.84
VPS52-216ENST00000471309 TOP1MTQ969P6 601 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 TRIM43Q96BQ3 446 aaPredicted RBP9.83□□□□□ -0.84
VPS52-216ENST00000471309 FUBP3Q96I24 572 aaKnown RBP eCLIP9.83□□□□□ -0.84
VPS52-216ENST00000471309 CFAP57Q96MR6 1250 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 RUNDC3BQ96NL0 473 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 SLITRK1Q96PX8 696 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 SLC2A13Q96QE2 648 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 TMEM209Q96SK2 561 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 TBCBQ99426 244 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 OSBPL8Q9BZF1 889 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 RC3H2Q9HBD1 1191 aaKnown RBP9.83□□□□□ -0.84
VPS52-216ENST00000471309 PRDM5Q9NQX1 630 aaPredicted RBP9.83□□□□□ -0.84
VPS52-216ENST00000471309 TMEM30AQ9NV96 361 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 TMLHEQ9NVH6 421 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 HCSTQ9UBK5 93 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 USP18Q9UMW8 372 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 EFR3BQ9Y2G0 817 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 NR2E1Q9Y466 385 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 CENPFP49454 3210 aa9.83□□□□□ -0.84
VPS52-216ENST00000471309 hCG_1818297A0A087WSY0 165 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 TCRBV7S2A1N4TA0A589 114 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 LRRD1A4D1F6 860 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 OR6C75A6NL08 312 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 C3orf70A6NLC5 250 aaPredicted RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 BHMG1C9JSJ3 638 aaPredicted RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 PI4K2BG5E9Z4 385 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 TRUB2O95900 331 aaKnown RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 EFEMP2O95967 443 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 RARAP10276 462 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 ITGB8P26012 769 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 IL1R2P27930 398 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 MATKP42679 507 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 CDKN2BP42772 138 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 HDAC4P56524 1084 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 BCAR1P56945 870 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 YWHAZP63104 245 aaKnown RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 TAZQ16635 292 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 C15orf59Q2T9L4 293 aaPredicted RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 CTXN3Q4LDR2 81 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 ATP13A4Q4VNC1 1196 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 ODF2Q5BJF6 829 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 FAM171A1Q5VUB5 890 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 TMCO3Q6UWJ1 677 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 VSTM1Q6UX27 236 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 CYP4V2Q6ZWL3 525 aaPredicted RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 STRADAQ7RTN6 431 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 GPRIN1Q7Z2K8 1008 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 ADAT2Q7Z6V5 191 aaKnown RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 CMTR2Q8IYT2 770 aaKnown RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 EIF1ADQ8N9N8 165 aaKnown RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 FAM172AQ8WUF8 416 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 HDAC7Q8WUI4 952 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 SLCO2A1Q92959 643 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 RNF25Q96BH1 459 aaPredicted RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 ZNF689Q96CS4 500 aaPredicted RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 PEBP4Q96S96 227 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 KCNK16Q96T55 309 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 HERPUD2Q9BSE4 406 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 DDX23Q9BUQ8 820 aaKnown RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 TRIM62Q9BVG3 475 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 RHOBTB2Q9BYZ6 727 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 GPR62Q9BZJ7 368 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 ULBP1Q9BZM6 244 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 CWH43Q9H720 699 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 LRRC19Q9H756 370 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 ZWILCHQ9H900 591 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 POPDC2Q9HBU9 364 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 NGRNQ9NPE2 291 aaKnown RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 GDF3Q9NR23 364 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 HOMER3Q9NSC5 361 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 KLHL11Q9NVR0 708 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.82□□□□□ -0.84
VPS52-216ENST00000471309 PCYOX1Q9UHG3 505 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 AMACRQ9UHK6 382 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 DMGDHQ9UI17 866 aaKnown RBP9.82□□□□□ -0.84
VPS52-216ENST00000471309 STAP1Q9ULZ2 295 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 PLXNA3P51805 1871 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 PTPRSQ13332 1948 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 ALPK3Q96L96 1907 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 KIAA1671Q9BY89 1806 aa9.82□□□□□ -0.84
VPS52-216ENST00000471309 CARNS1A5YM72 827 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 FAM187AA6NFU0 413 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 H7C4K7 107 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 MDM4O15151 490 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 PRPSAP2O60256 369 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 TBC1D4O60343 1298 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 UPP2O95045 317 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 TJP3O95049 919 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 ZBED1O96006 694 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 BDNFP23560 247 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 NOS2P35228 1153 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 MAGEA11P43364 429 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 ALDH7A1P49419 539 aaKnown RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 WDR5P61964 334 aaKnown RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 ATP11AP98196 1134 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms