RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SRRM1Q8IYB3 904 aaKnown RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 PDIK1LQ8N165 341 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 FBF1Q8TES7 1133 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 PYROXD1Q8WU10 500 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 CKAP2Q8WWK9 683 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 ALKBH8Q96BT7 664 aaKnown RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 HAUS1Q96CS2 278 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 CDCA5Q96FF9 252 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 HPDLQ96IR7 371 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 FAM84AQ96KN4 292 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 C9orf72Q96LT7 481 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 HEXIM2Q96MH2 286 aaKnown RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 ACAP3Q96P50 834 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 ZNF317Q96PQ6 595 aaPredicted RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 TGS1Q96RS0 853 aaKnown RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 ELAC2Q9BQ52 826 aaKnown RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 GRIP2Q9C0E4 1043 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 XYLT2Q9H1B5 865 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 VRTNQ9H8Y1 702 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 PTPRHQ9HD43 1115 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 METTL5Q9NRN9 209 aaKnown RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 DNAJC17Q9NVM6 304 aaKnown RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 KLHL14Q9P2G3 628 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 PSMC3IPQ9P2W1 217 aaPredicted RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 HESX1Q9UBX0 185 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 FETUBQ9UGM5 382 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 DNPEPQ9ULA0 475 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 ARL2BPQ9Y2Y0 163 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 C2CD2Q9Y426 696 aa8.37□□□□□ -1.07
SMC4-212ENST00000470240 POLR2AP24928 1970 aaKnown RBP8.37□□□□□ -1.07
SMC4-212ENST00000470240 DNAJC25-GNG10A0A024R161 153 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 A6NJR5 290 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 POM121CA8CG34 1229 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 TCP11X1B4DZS4 312 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 APOC4-APOC2K7ER74 178 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 ABLIM1O14639 778 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 XPOTO43592 962 aaKnown RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 PRPSAP2O60256 369 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 CST8O60676 142 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 ATP2C2O75185 946 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 CILPO75339 1184 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 CNMDO75829 334 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 TOMM70O94826 608 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 MICAL2O94851 1124 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 ARIH2O95376 493 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 GJB6O95452 261 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 APOC2P02655 101 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 LGALS2P05162 132 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 EDN1P05305 212 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 NFICP08651 508 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 PECAM1P16284 738 aaPredicted RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 KDELR1P24390 212 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 ALDH3A1P30838 453 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 STIP1P31948 543 aaKnown RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 SLC8A1P32418 973 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 CTCFP49711 727 aaPredicted RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 SLC18A1P54219 525 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 RAD23BP54727 409 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 EIF3EP60228 445 aaKnown RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 DYNLT1P63172 113 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 IGBP1P78318 339 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 OTUD4Q01804 1114 aaKnown RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 ROR1Q01973 937 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 RNASELQ05823 741 aaKnown RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 R3HDM1Q15032 1099 aaKnown RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 PDK2Q15119 407 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 PCBP1Q15365 356 aaKnown RBP eCLIP8.36□□□□□ -1.077e-12■■■■■ 38.2
SMC4-212ENST00000470240 SNCBQ16143 134 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 PTPN20Q4JDL3 420 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 HHATQ5VTY9 493 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 FYB2Q5VWT5 728 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 NUGGCQ68CJ6 796 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 JADE1Q6IE81 842 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 TMEM214Q6NUQ4 689 aaKnown RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 C4orf22Q6V702 233 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 RIPOR1Q6ZS17 1223 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 USP50Q70EL3 339 aaPredicted RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 ARMCX2Q7L311 632 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 SPATA21Q7Z572 469 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 ANKS1BQ7Z6G8 1248 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 PIGWQ7Z7B1 504 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 ZNF410Q86VK4 478 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 ZBED8Q8IZ13 594 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 VWA5B2Q8N398 1253 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 CCDC63Q8NA47 563 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 GPRC5AQ8NFJ5 357 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 PPTC7Q8NI37 304 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 AFG1LQ8WV93 481 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 TFAP2BQ92481 460 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 CCT6BQ92526 530 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 OPTNQ96CV9 577 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 GAS2L1Q99501 681 aaPredicted RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 HERPUD2Q9BSE4 406 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 CNPY3Q9BT09 278 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 NT5C1AQ9BXI3 368 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 CALN1Q9BXU9 219 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 TRABDQ9H4I3 376 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 SSU72Q9NP77 194 aaKnown RBP8.36□□□□□ -1.07
SMC4-212ENST00000470240 SLC5A4Q9NY91 659 aa8.36□□□□□ -1.07
SMC4-212ENST00000470240 TBK1Q9UHD2 729 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms