RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SCGB1D2O95969 90 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 UQCRC1P31930 480 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 LMAN2Q12907 356 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 ZNF268Q14587 947 aaPredicted RBP6.46□□□□□ -1.38
COL11A1-208ENST00000470170 RABEP1Q15276 862 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 INSCQ1MX18 579 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 AWAT1Q58HT5 328 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 TRIM43Q96BQ3 446 aaPredicted RBP6.46□□□□□ -1.38
COL11A1-208ENST00000470170 ZC3H10Q96K80 434 aaKnown RBP6.46□□□□□ -1.38
COL11A1-208ENST00000470170 FYTTD1Q96QD9 318 aaKnown RBP6.46□□□□□ -1.38
COL11A1-208ENST00000470170 STK31Q9BXU1 1019 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 L1RE1Q9UN81 338 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 USP22Q9UPT9 525 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 PAXBP1Q9Y5B6 917 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 LOC102723971A0A1B0GUV8 181 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
COL11A1-208ENST00000470170 TMEM232C9JQI7 657 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 E5RJQ4 531 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 ATP5F1P24539 256 aaPredicted RBP6.45□□□□□ -1.38
COL11A1-208ENST00000470170 KLRC1P26715 233 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 IL1R2P27930 398 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 EPHA3P29320 983 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 COPB1P53618 953 aaKnown RBP6.45□□□□□ -1.38
COL11A1-208ENST00000470170 MINDY4Q4G0A6 757 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 C3orf38Q5JPI3 329 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 FAM102BQ5T8I3 360 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 PTCHD4Q6ZW05 846 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 CHPFQ8IZ52 775 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 ADAMTS18Q8TE60 1221 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 CTHRC1Q96CG8 243 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 ZBTB45Q96K62 511 aaPredicted RBP6.45□□□□□ -1.38
COL11A1-208ENST00000470170 FAM118BQ9BPY3 351 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 VN1R3Q9BXE9 311 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 TRIM5Q9C035 493 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 TPCN1Q9ULQ1 816 aa6.45□□□□□ -1.38
COL11A1-208ENST00000470170 CD3EAPO15446 510 aaKnown RBP6.44□□□□□ -1.38
COL11A1-208ENST00000470170 SPRY2O43597 315 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 RRP9O43818 475 aaKnown RBP6.44□□□□□ -1.38
COL11A1-208ENST00000470170 HGFP14210 728 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 PTDSS1P48651 473 aaKnown RBP6.44□□□□□ -1.38
COL11A1-208ENST00000470170 DIO1P49895 249 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 MTHFSP49914 203 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 TRIP6Q15654 476 aaKnown RBP6.44□□□□□ -1.38
COL11A1-208ENST00000470170 PLEKHG6Q3KR16 790 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 ZNF813Q6ZN06 617 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 RAB11FIP4Q86YS3 637 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 PRSS3P2Q8NHM4 247 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 CCDC17Q96LX7 622 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 C1orf112Q9NSG2 853 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 TRNAU1APQ9NX07 287 aaKnown RBP6.44□□□□□ -1.38
COL11A1-208ENST00000470170 AFF4Q9UHB7 1163 aaKnown RBP6.44□□□□□ -1.38
COL11A1-208ENST00000470170 HDAC9Q9UKV0 1011 aa6.44□□□□□ -1.38
COL11A1-208ENST00000470170 BTBD19C9JJ37 291 aa6.43□□□□□ -1.38
COL11A1-208ENST00000470170 FCHO1O14526 889 aa6.43□□□□□ -1.38
COL11A1-208ENST00000470170 CCP110O43303 1012 aa6.43□□□□□ -1.38
COL11A1-208ENST00000470170 MT-CO3P00414 261 aa6.43□□□□□ -1.38
COL11A1-208ENST00000470170 U2AF1L5P0DN76 240 aaPredicted RBP6.43□□□□□ -1.38
COL11A1-208ENST00000470170 APEHP13798 732 aaKnown RBP6.43□□□□□ -1.38
COL11A1-208ENST00000470170 ZKSCAN1P17029 563 aaPredicted RBP6.43□□□□□ -1.38
COL11A1-208ENST00000470170 TIRAPP58753 221 aa6.43□□□□□ -1.38
COL11A1-208ENST00000470170 RPS16P62249 146 aaKnown RBP6.43□□□□□ -1.38
COL11A1-208ENST00000470170 U2AF1Q01081 240 aaKnown RBP eCLIP6.43□□□□□ -1.38
COL11A1-208ENST00000470170 CNGA2Q16280 664 aa6.43□□□□□ -1.38
COL11A1-208ENST00000470170 NFE2Q16621 373 aaPredicted RBP6.43□□□□□ -1.38
COL11A1-208ENST00000470170 ARHGAP29Q52LW3 1261 aa6.43□□□□□ -1.38
COL11A1-208ENST00000470170 NMD3Q96D46 503 aaKnown RBP6.43□□□□□ -1.38
COL11A1-208ENST00000470170 WDYHV1Q96HA8 205 aa6.43□□□□□ -1.38
COL11A1-208ENST00000470170 ISM1B1AKI9 464 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 PROB1E7EW31 1015 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 AGPSO00116 658 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 ADAM10O14672 748 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 DSCR3O14972 297 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 FRS3O43559 492 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 CREB1P16220 341 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 TIAL1Q01085 375 aaKnown RBP eCLIP6.42□□□□□ -1.38
COL11A1-208ENST00000470170 ARHGEF7Q14155 803 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 PPP2R5AQ15172 486 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 NPY5RQ15761 445 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 PXDC1Q5TGL8 231 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 MEX3CQ5U5Q3 659 aaKnown RBP6.42□□□□□ -1.38
COL11A1-208ENST00000470170 BHLHA9Q7RTU4 235 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 PNISRQ8TF01 805 aaKnown RBP6.42□□□□□ -1.38
COL11A1-208ENST00000470170 FAM204AQ9H8W3 233 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 SNX15Q9NRS6 342 aa6.42□□□□□ -1.38
COL11A1-208ENST00000470170 DDX20Q9UHI6 824 aaKnown RBP6.42□□□□□ -1.38
COL11A1-208ENST00000470170 M0R3H8 397 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 RAB27BO00194 218 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 PIAS2O75928 621 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 A1BGP04217 495 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 NR4A2P43354 598 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 PGDP52209 483 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 MAPK7Q13164 816 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 STK3Q13188 491 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 ZNF750Q32MQ0 723 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 TMEM65Q6PI78 240 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 TCEAL8Q8IYN2 117 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 LINC01465Q8N7H1 131 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 NANOGP1Q8N7R0 232 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 MAGEB6Q8N7X4 407 aa6.41□□□□□ -1.38
COL11A1-208ENST00000470170 MAFAQ8NHW3 353 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms