RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 CCDC122Q5T0U0 273 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 SFMBT2Q5VUG0 894 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 TDRD10Q5VZ19 366 aaKnown RBP18.67■□□□□ 0.58
MRPL28-208ENST00000469744 DPH6Q7L8W6 267 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 SPATA2LQ8IUW3 424 aaPredicted RBP18.67■□□□□ 0.58
MRPL28-208ENST00000469744 PARD3BQ8TEW8 1205 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 UBXN4Q92575 508 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 GCNAQ96QF7 691 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 DDX23Q9BUQ8 820 aaKnown RBP18.67■□□□□ 0.58
MRPL28-208ENST00000469744 GPR88Q9GZN0 384 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 SMG9Q9H0W8 520 aaKnown RBP18.67■□□□□ 0.58
MRPL28-208ENST00000469744 CRTAC1Q9NQ79 661 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 DLGAP2Q9P1A6 1054 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 NXF1Q9UBU9 619 aaKnown RBP18.67■□□□□ 0.58
MRPL28-208ENST00000469744 PTPRDP23468 1912 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 CACNA1IQ9P0X4 2223 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 WDR87Q6ZQQ6 2873 aa18.67■□□□□ 0.58
MRPL28-208ENST00000469744 PJA2O43164 708 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 WARSP23381 471 aaKnown RBP18.66■□□□□ 0.58
MRPL28-208ENST00000469744 CDC25CP30307 473 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 EIF4A3P38919 411 aaKnown RBP18.66■□□□□ 0.58
MRPL28-208ENST00000469744 KIF11P52732 1056 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 TNNC1P63316 161 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 NAA30Q147X3 362 aaPredicted RBP18.66■□□□□ 0.58
MRPL28-208ENST00000469744 ANGPT1Q15389 498 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 WHAMMP3Q1A5X7 153 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 DPY19L2P1Q6NXN4 242 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 TMEM150AQ86TG1 271 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 SCN4BQ8IWT1 228 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 MYLPFQ96A32 169 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 LRRC3BQ96PB8 259 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 XYLT2Q9H1B5 865 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 ABCB6Q9NP58 842 aa18.66■□□□□ 0.58
MRPL28-208ENST00000469744 ANXA13P27216 316 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 KIF5AQ12840 1032 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 ELF2Q15723 593 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 FAM171BQ6P995 826 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 GBP6Q6ZN66 633 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 MFSD6LQ8IWD5 586 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 FAM186BQ8IYM0 893 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 OR6B3Q8NGW1 331 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 DEPDC1BQ8WUY9 529 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 DNASE1L2Q92874 299 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 SNX25Q9H3E2 840 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 TASP1Q9H6P5 420 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 LTB4R2Q9NPC1 389 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 CDH9Q9ULB4 789 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 PCDHA13Q9Y5I0 950 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 GREB1Q4ZG55 1949 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 SHISA7A6NL88 538 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 FAM170BA6NMN3 283 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 ZNF263O14978 683 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 AKR1B10O60218 316 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 VNN1O95497 513 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 TARSP26639 723 aaKnown RBP18.65■□□□□ 0.58
MRPL28-208ENST00000469744 GNL1P36915 607 aaPredicted RBP18.65■□□□□ 0.58
MRPL28-208ENST00000469744 RAP1GAPP47736 663 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 RPL10AP62906 217 aaKnown RBP18.65■□□□□ 0.58
MRPL28-208ENST00000469744 CYP27A1Q02318 531 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 EXOC3L4Q17RC7 722 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 CFAP221Q4G0U5 840 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 MDH1BQ5I0G3 518 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 HGSNATQ68CP4 663 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 SCARA5Q6ZMJ2 495 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 RSRC2Q7L4I2 434 aaKnown RBP18.65■□□□□ 0.58
MRPL28-208ENST00000469744 IRF7Q92985 503 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 SLC35C1Q96A29 364 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 ZFYVE19Q96K21 471 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 SLC46A2Q9BY10 475 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 IRF2BPLQ9H1B7 796 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 DPEP3Q9H4B8 488 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 DEF6Q9H4E7 631 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 SMYD3Q9H7B4 428 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 LUC7LQ9NQ29 371 aaKnown RBP18.65■□□□□ 0.58
MRPL28-208ENST00000469744 GUCA1BQ9UMX6 200 aa18.65■□□□□ 0.58
MRPL28-208ENST00000469744 BZW2Q9Y6E2 419 aaKnown RBP18.65■□□□□ 0.58
MRPL28-208ENST00000469744 KIF26AQ9ULI4 1882 aaPredicted RBP18.64■□□□□ 0.57
MRPL28-208ENST00000469744 SLC38A8A6NNN8 435 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 DPYSL4O14531 572 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 MAPK13O15264 365 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 F11P03951 625 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 C4BPAP04003 597 aaKnown RBP18.64■□□□□ 0.57
MRPL28-208ENST00000469744 CSH1P0DML2 217 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 CSH2P0DML3 217 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 BDNFP23560 247 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 MCCD1P59942 119 aaPredicted RBP18.64■□□□□ 0.57
MRPL28-208ENST00000469744 POLR2FP61218 127 aaKnown RBP18.64■□□□□ 0.57
MRPL28-208ENST00000469744 CLDN10P78369 228 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 AMPD2Q01433 879 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 NCOA4Q13772 614 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 ERCC6LQ2NKX8 1250 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 ZNF699Q32M78 642 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 C4orf50Q6ZRC1 276 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 YAF2Q8IY57 180 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 MAB21L3Q8N8X9 362 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 TTC8Q8TAM2 541 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 PCED1BQ96HM7 432 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.64■□□□□ 0.571e-6■■■■■ 61.4
MRPL28-208ENST00000469744 NDRG2Q9UN36 371 aaKnown RBP18.64■□□□□ 0.57
MRPL28-208ENST00000469744 FRMD4BQ9Y2L6 1034 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms